Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.220330	Fxc1	fractured callus expressed transcript 1	7		14356
Gene Ontology	inner membrane | mitochondrial inner membrane | mitochondrion | protein targeting | protein translocase activity | protein transport | protein-mitochondrial targeting | transport
Human Homolog	FXC1[fracture callus 1 homolog (rat)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 99 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCTGTGAAA (4) 11.4 0.0114 P8 Cb GC CCCGCCCTGG (3) 8.2 0.0082 P8 Cb GC CCTGTAATCC (34) 6.5 0.0065 P8 Cb GC AGACCACATC (3) 1.6 0.0016 P8 Cb GC CTCCTGCCTT (10) 1.6 0.0016 Cb medulloblastoma TGCTGTGAAA (4) 48.6 0.0486 Cb medulloblastoma CCTGTAATCC (34) 11.6 0.0116 Cb medulloblastoma CCCGCCCTGG (3) 2.3 0.0023 Cb medulloblastoma CTCCTGCCTT (10) 2.3 0.0023 Cb medulloblastoma TGTACTGCCT (3) 2.3 0.0023 P8 GC+1d culture TGCTGTGAAA (4) 24 0.024 P8 GC+1d culture CCCGCCCTGG (3) 5.7 0.0057 P8 GC+1d culture AGACCACATC (3) 2.3 0.0023 P8 GC+1d culture CCTGTAATCC (34) 1.1 0.0011 P8 GC+1d culture CTCCTGCCTT (10) 1.1 0.0011 P8 GC+1d culture TGTACTGCCT (3) 1.1 0.0011 P8 GC+1d culture TGTGCAGCCC (3) 1.1 0.0011 P8 GC+SHH+1d culture TGCTGTGAAA (4) 26.9 0.0269 P8 GC+SHH+1d culture CCTGTAATCC (34) 4.7 0.0047 P8 GC+SHH+1d culture CCCGCCCTGG (3) 3.5 0.0035 P8 GC+SHH+1d culture CTCCTGCCTT (10) 2.3 0.0023 3T3 fibroblasts CCCGCCCTGG (3) 35 0.035 3T3 fibroblasts CCTGTAATCC (34) 10.5 0.0105 3T3 fibroblasts CTCCTGCCTT (10) 7 0.007 3T3 fibroblasts TGCTGTGAAA (4) 3.5 0.0035 E15 cortex CCCGCCCTGG (3) 9.9 0.0099 E15 cortex TGCTGTGAAA (4) 9.9 0.0099 E15 cortex CCTGTAATCC (34) 4.9 0.0049 E15 cortex CTCCTGCCTT (10) 4.9 0.0049 P1 cortex TGCTGTGAAA (4) 22.7 0.0227 P1 cortex CCTGTAATCC (34) 13.6 0.0136 P1 cortex CCCGCCCTGG (3) 4.5 0.0045 Hypothalamus TGCTGTGAAA (4) 45.3 0.0453 Hypothalamus CCTGTAATCC (34) 5.4 0.0054 Hypothalamus CCCGCCCTGC (2) 3.6 0.0036 Hypothalamus TGCTGTGAGT (2) 3.6 0.0036 Hypothalamus CTCCTGCCTT (10) 1.8 0.0018 Hypothalamus TGTACTTGTC 1.8 0.0018 Hypothalamus TGTGCAGCCC (3) 1.8 0.0018 E12.5 retina TGCTGTGAAA (4) 11.3 0.0113 E12.5 retina CTCCTGCCTT (10) 5.6 0.0056 E12.5 retina CCTGTAATCC (34) 3.8 0.0038 E12.5 retina AGGCGGTGGT 1.9 0.0019 E12.5 retina CCCGCCCTGG (3) 1.9 0.0019 E12.5 retina TGTACTTGTC 1.9 0.0019 E14.5 retina TGCTGTGAAA (4) 16.4 0.0164 E14.5 retina CCTGTAATCC (34) 5.5 0.0055 E14.5 retina CTCCTGCCTT (10) 3.6 0.0036 E16.5 retina CTCCTGCCTT (10) 7.2 0.0072 E16.5 retina TGCTGTGAAA (4) 5.4 0.0054 E16.5 retina CCCGCCCTGG (3) 3.6 0.0036 E16.5 retina CCTGTAATCC (34) 3.6 0.0036 E16.5 retina CCCGCCCTGC (2) 1.8 0.0018 E16.5 retina TGTACTGCCT (3) 1.8 0.0018 E18.5 retina TGCTGTGAAA (4) 25.5 0.0255 E18.5 retina CTCCTGCCTT (10) 5.5 0.0055 E18.5 retina AGACCACATC (3) 1.8 0.0018 E18.5 retina CCTGTAATCC (34) 1.8 0.0018 P0.5 retina TGCTGTGAAA (4) 9.8 0.0098 P0.5 retina CCTGTAATCC (34) 3.9 0.0039 P0.5 retina CCCGCCCTGG (3) 2 0.002 P2.5 retina CCCGCCCTGG (3) 7 0.007 P2.5 retina TGCTGTGAAA (4) 7 0.007 P2.5 retina CCTGTAATCC (34) 3.5 0.0035 P2.5 retina CTCCTGCCTT (10) 3.5 0.0035 P4.5 retina TGCTGTGAAA (4) 17.8 0.0178 P4.5 retina CCCGCCCTGG (3) 5.9 0.0059 P4.5 retina CCTGTAATCC (34) 5.9 0.0059 P4.5 retina CTCCTGCCTT (10) 2 0.002 P4.5 retina TGCTGTGAGT (2) 2 0.002 P6.5 retina CTCCTGCCTT (10) 10 0.01 P6.5 retina TGCTGTGAAA (4) 8.3 0.0083 P6.5 retina CCCGCCCTGC (2) 3.3 0.0033 P6.5 retina CCCGCCCTGG (3) 3.3 0.0033 P6.5 retina CCTGTAATCC (34) 1.7 0.0017 P10.5 crx- retina TGCTGTGAAA (4) 18.6 0.0186 P10.5 crx- retina CTCCTGCCTT (10) 13 0.013 P10.5 crx- retina CCCGCCCTGG (3) 9.3 0.0093 P10.5 crx- retina CCTGTAATCC (34) 3.7 0.0037 P10.5 crx- retina AGACCACATC (3) 1.9 0.0019 P10.5 crx- retina AGGCGGTGGT 1.9 0.0019 P10.5 crx- retina TGTACTTGTC 1.9 0.0019 P10.5 crx+ retina TGCTGTGAAA (4) 25 0.025 P10.5 crx+ retina CTCCTGCCTT (10) 7.7 0.0077 P10.5 crx+ retina CCTGTAATCC (34) 3.8 0.0038 P10.5 crx+ retina CCCGCCCTGG (3) 1.9 0.0019 Adult retinal TGCTGTGAAA (4) 11.1 0.0111 Adult retinal CCCGCCCTGG (3) 3.7 0.0037 Adult retinal CCTGTAATCC (34) 3.7 0.0037 Adult retinal AGGCGGTGGT 1.9 0.0019 Adult retinal TGTGCAGCCC (3) 1.9 0.0019 ONL TGCTGTGAAA (4) 9.6 0.0096 ONL CTCCTGCCTT (10) 7.7 0.0077 ONL CCTGTAATCC (34) 3.8 0.0038 ONL AGACCACATC (3) 1.9 0.0019 ONL AGGCGGTGGT 1.9 0.0019 ONL CCCGCCCTGC (2) 1.9 0.0019 ONL CCCGCCCTGG (3) 1.9 0.0019 ONL TGTGCAGCCC (3) 1.9 0.0019