Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22347	Pnn	pinin	12	12 23.0 cM	18949
Human Homolog	PNN[pinin, desmosome associated protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGTAAAAAT (2) 3.3 0.0033 Cb medulloblastoma CCAATCTGTG (4) 2.3 0.0023 P8 GC+1d culture CAATTCTTAA 1.1 0.0011 P8 GC+1d culture CCAATCTGTG (4) 1.1 0.0011 P8 GC+SHH+1d culture TTGTAAAAAT (2) 2.3 0.0023 P8 GC+SHH+1d culture ATAAGGGAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture CCAATCTGTG (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTCAGTTAT (2) 1.2 0.0012 3T3 fibroblasts CCAATCTGTG (4) 3.5 0.0035 3T3 fibroblasts TTTCAGTTAT (2) 3.5 0.0035 E15 cortex CCAATCTGTG (4) 9.9 0.0099 E15 cortex AAGGGAAAAA (8) 4.9 0.0049 E15 cortex GATGAGAAGG (3) 4.9 0.0049 E15 cortex TTGTAAAAAT (2) 4.9 0.0049 E15 cortex TTTCAGTTAT (2) 4.9 0.0049 P1 cortex CCAATCTGTG (4) 4.5 0.0045 Hypothalamus CCAATCTGTG (4) 3.6 0.0036 Hypothalamus CAATTCTTAA 1.8 0.0018 Hypothalamus GATGAGAAGG (3) 1.8 0.0018 Hypothalamus TTGTAAAAAT (2) 1.8 0.0018 E12.5 retina CCAATCTGTG (4) 5.6 0.0056 E12.5 retina TTGTAAAAAT (2) 1.9 0.0019 E14.5 retina TTGTAAAAAT (2) 5.5 0.0055 E14.5 retina CAATTCTTAA 1.8 0.0018 E14.5 retina CCAATCTGTG (4) 1.8 0.0018 E16.5 retina TTGTAAAAAT (2) 7.2 0.0072 E16.5 retina CCAATCTGTG (4) 3.6 0.0036 E18.5 retina TTGTAAAAAT (2) 3.6 0.0036 E18.5 retina CAATTCTTAA 1.8 0.0018 E18.5 retina CCAATCTGTG (4) 1.8 0.0018 P0.5 retina CCAATCTGTG (4) 7.9 0.0079 P0.5 retina CAATTCTTAA 3.9 0.0039 P2.5 retina CCAATCTGTG (4) 5.3 0.0053 P2.5 retina ATAAGGGAAA (2) 1.8 0.0018 P4.5 retina CAATTCTTAA 2 0.002 P4.5 retina CCAATCTGTG (4) 2 0.002 P4.5 retina TTGTAAAAAT (2) 2 0.002 P4.5 retina TTTCAGTTAT (2) 2 0.002 P6.5 retina CCAATCTGTG (4) 5 0.005 P6.5 retina GATGAGAAGG (3) 1.7 0.0017 P6.5 retina TTGTAAAAAT (2) 1.7 0.0017 P10.5 crx- retina AAGGGAAAAA (8) 1.9 0.0019 P10.5 crx- retina CAATTCTTAA 1.9 0.0019 P10.5 crx- retina CCAATCTGTG (4) 1.9 0.0019 P10.5 crx+ retina AAGGGAAAAA (8) 1.9 0.0019 P10.5 crx+ retina ATAAGGGAAA (2) 1.9 0.0019 P10.5 crx+ retina CCAATCTGTG (4) 1.9 0.0019 Adult retinal TTGTAAAAAT (2) 5.6 0.0056 Adult retinal CCAATCTGTG (4) 1.9 0.0019 ONL CCAATCTGTG (4) 1.9 0.0019