Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.22347
Pnn
pinin
12
12 23.0 cM
18949
Human Homolog
PNN[pinin, desmosome associated protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTGTAAAAAT
(
2
)
3.3
0.0033
Cb medulloblastoma
CCAATCTGTG
(
2
)
2.3
0.0023
P8 GC+1d culture
CAATTCTTAA
1.1
0.0011
P8 GC+1d culture
CCAATCTGTG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TTGTAAAAAT
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CCAATCTGTG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTCAGTTAT
1.2
0.0012
3T3 fibroblasts
CCAATCTGTG
(
2
)
3.5
0.0035
3T3 fibroblasts
TTTCAGTTAT
3.5
0.0035
E15 cortex
CCAATCTGTG
(
2
)
9.9
0.0099
E15 cortex
GATGAGAAGG
(
2
)
4.9
0.0049
E15 cortex
TTGTAAAAAT
(
2
)
4.9
0.0049
E15 cortex
TTTCAGTTAT
4.9
0.0049
P1 cortex
CCAATCTGTG
(
2
)
4.5
0.0045
Hypothalamus
CCAATCTGTG
(
2
)
3.6
0.0036
Hypothalamus
CAATTCTTAA
1.8
0.0018
Hypothalamus
GATGAGAAGG
(
2
)
1.8
0.0018
Hypothalamus
TTGTAAAAAT
(
2
)
1.8
0.0018
E12.5 retina
CCAATCTGTG
(
2
)
5.6
0.0056
E12.5 retina
TTGTAAAAAT
(
2
)
1.9
0.0019
E14.5 retina
TTGTAAAAAT
(
2
)
5.5
0.0055
E14.5 retina
CAATTCTTAA
1.8
0.0018
E14.5 retina
CCAATCTGTG
(
2
)
1.8
0.0018
E16.5 retina
TTGTAAAAAT
(
2
)
7.2
0.0072
E16.5 retina
CCAATCTGTG
(
2
)
3.6
0.0036
E18.5 retina
TTGTAAAAAT
(
2
)
3.6
0.0036
E18.5 retina
CAATTCTTAA
1.8
0.0018
E18.5 retina
CCAATCTGTG
(
2
)
1.8
0.0018
P0.5 retina
CCAATCTGTG
(
2
)
7.9
0.0079
P0.5 retina
CAATTCTTAA
3.9
0.0039
P2.5 retina
CCAATCTGTG
(
2
)
5.3
0.0053
P4.5 retina
CAATTCTTAA
2
0.002
P4.5 retina
CCAATCTGTG
(
2
)
2
0.002
P4.5 retina
TTGTAAAAAT
(
2
)
2
0.002
P4.5 retina
TTTCAGTTAT
2
0.002
P6.5 retina
CCAATCTGTG
(
2
)
5
0.005
P6.5 retina
GATGAGAAGG
(
2
)
1.7
0.0017
P6.5 retina
TTGTAAAAAT
(
2
)
1.7
0.0017
P10.5 crx- retina
CAATTCTTAA
1.9
0.0019
P10.5 crx- retina
CCAATCTGTG
(
2
)
1.9
0.0019
P10.5 crx+ retina
CCAATCTGTG
(
2
)
1.9
0.0019
Adult retinal
TTGTAAAAAT
(
2
)
5.6
0.0056
Adult retinal
CCAATCTGTG
(
2
)
1.9
0.0019
ONL
CCAATCTGTG
(
2
)
1.9
0.0019