Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.223674	Syp	synaptophysin	X	X 1.5 cM	20977
Mm.223674	A230093K24Rik	RIKEN cDNA A230093K24 gene	X		319279
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 89 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGGCCCTGG (3) GTGGGTTCCG (2) GTTGGGAGCT (2) 4.8 0.0048 Cb medulloblastoma CACTAGGGGC (2) GAGTGGGTCG (2) GGGGCCCTGG (3) GTTGGGAGCT (2) TCGATATCAA (2) 30 0.03 P8 GC+1d culture ATCACAGGCA (2) CACTAGGGGC (2) CAGGGAACTG CGCGCACCTC (2) GAGTGGGTCG (2) GTGGGTTCCG (2) GTTGGGAGCT (2) 41 0.041 P8 GC+SHH+1d culture ATCACAGGCA (2) CAGGGAACTG CGCGCACCTC (2) GAGTGGGTCG (2) GTGGGTTCCG (2) GTTGGGAGCT (2) 19.9 0.0199 3T3 fibroblasts ATCACAGGCA (2) 3.5 0.0035 E15 cortex ATCACAGGCA (2) CACTAGGGGC (2) GTTGGGAGCT (2) 24.6 0.0246 P1 cortex ATCACAGGCA (2) GTTGGGAGCT (2) 27.2 0.0272 Hypothalamus ATCACAGGCA (2) CACTAGGGGC (2) CAGGGAACTG CGCGCACCTC (2) GAGTGGGTCG (2) GCCACACACC GGGGCCCTGG (3) GGGGGCCCTG GTGGGTTCCG (2) GTTGGGAGCT (2) TCGATATCAA (2) 56 0.056 E14.5 retina ATCACAGGCA (2) GAGTGGGTCG (2) GGGGCCCTGG (3) GTTGGGAGCT (2) TCGATATCAA (2) 10.8 0.0108 E16.5 retina GGGGCACTGG GTTGGGAGCT (2) 3.6 0.0036 E18.5 retina ATCACAGGCA (2) CAGGGAACTG 3.6 0.0036 P0.5 retina ATCACAGGCA (2) CACTAGGGGC (2) GAGTGGGTCG (2) GTTGGGAGCT (2) 11.8 0.0118 P2.5 retina ATCACAGGCA (2) CAGGGAACTG GTTGGGAGCT (2) 7.1 0.0071 P4.5 retina CACTAGGGGC (2) CAGGGAACTG GAGTGGGTCG (2) GGGGCCCTGG (3) GTGGGTTCCG (2) GTTGGGAGCT (2) 18 0.018 P6.5 retina ATCACAGGCA (2) CGCGCACCTC (2) GAGTGGGTCG (2) GTGGGTTCCG (2) GTTGGGAGCT (2) 23.5 0.0235 P10.5 crx- retina ATCACAGGCA (2) CAGGGAACTG GGGGGCCCTG GTTGGGAGCT (2) 24.2 0.0242 P10.5 crx+ retina ATCACAGGCA (2) CACTAGGGGC (2) CGCGCACCTC (2) GAGTGGGTCG (2) GGGGCCCTGG (3) GTGGGTTCCG (2) GTTGGGAGCT (2) 36.5 0.0365 Adult retinal CACTAGGGGC (2) CGCGCACCTC (2) GAGTGGGTCG (2) GGGGCCCTGG (3) GGGGGCCCTG GTGGGTTCCG (2) GTTGGGAGCT (2) 46.5 0.0465 ONL CACTAGGGGC (2) CGCGCACCTC (2) GAGTGGGTCG (2) GCCACACACC GGGGCACTGG GTTGGGAGCT (2) 21 0.021