Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22657	Krt2-5	keratin complex 2, basic, gene 5	15	15 58.79 cM	110308
Gene Ontology	cellular morphogenesis | cytoskeleton organization and biogenesis | epidermal differentiation | intermediate filament | protein binding | structural constituent of cytoskeleton
Human Homolog	KRT5[keratin 5 (epidermolysis bullosa simplex, Dowling-Meara/Kobner/Weber-Cockayne types)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGAAGCCAG (6) 13.1 0.0131 P8 Cb GC TTTCTTTGGT (3) 9.8 0.0098 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC CAGGACCTGG (4) 3.3 0.0033 Cb medulloblastoma GGGAAGCCAG (6) 6.9 0.0069 Cb medulloblastoma TTTCTTTGGT (3) 4.6 0.0046 Cb medulloblastoma GACACAACAA (3) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture GGGAAGCCAG (6) 10.3 0.0103 P8 GC+1d culture TTTCTTTGGT (3) 4.6 0.0046 P8 GC+1d culture GCTGAAGCTG (2) 1.1 0.0011 P8 GC+SHH+1d culture GGGAAGCCAG (6) 10.5 0.0105 P8 GC+SHH+1d culture TTTCTTTGGT (3) 7 0.007 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture GCTGAAGCTG (2) 1.2 0.0012 3T3 fibroblasts GGGAAGCCAG (6) 10.5 0.0105 E15 cortex GCTGCTGGAG (6) 9.9 0.0099 E15 cortex GGGAAGCCAG (6) 9.9 0.0099 E15 cortex GCTGAAGCTG (2) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex GGGAAGCCAG (6) 18.2 0.0182 P1 cortex TTTCTTTGGT (3) 9.1 0.0091 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus GGGAAGCCAG (6) 3.6 0.0036 Hypothalamus TTTCTTTGGT (3) 1.8 0.0018 E12.5 retina GGGAAGCCAG (6) 9.4 0.0094 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina GGGAAGCCAG (6) 20 0.02 E14.5 retina CAGGACCTGG (4) 1.8 0.0018 E14.5 retina GCTGAAGCTG (2) 1.8 0.0018 E16.5 retina GGGAAGCCAG (6) 27.2 0.0272 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina TTTCTTTGGT (3) 3.6 0.0036 E16.5 retina CCAGGACCCT 1.8 0.0018 E18.5 retina GGGAAGCCAG (6) 10.9 0.0109 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina TTTCTTTGGT (3) 1.8 0.0018 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina GGGAAGCCAG (6) 7.9 0.0079 P0.5 retina GCTGAAGCTG (2) 5.9 0.0059 P0.5 retina TTTCTTTGGT (3) 3.9 0.0039 P2.5 retina GGGAAGCCAG (6) 15.8 0.0158 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina GCTGCTGGAG (6) 1.8 0.0018 P2.5 retina TTTCTTTGGT (3) 1.8 0.0018 P4.5 retina GGGAAGCCAG (6) 11.9 0.0119 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina GACACAACAA (3) 2 0.002 P4.5 retina GCTGAAGCTG (2) 2 0.002 P6.5 retina GGGAAGCCAG (6) 15 0.015 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina TTTCTTTGGT (3) 3.3 0.0033 P6.5 retina CCAGGACCCT 1.7 0.0017 P10.5 crx- retina GGGAAGCCAG (6) 14.9 0.0149 P10.5 crx- retina CAGGACCTGG (4) 1.9 0.0019 P10.5 crx- retina GCTGAAGCTG (2) 1.9 0.0019 P10.5 crx+ retina GGGAAGCCAG (6) 19.2 0.0192 P10.5 crx+ retina TTTCTTTGGT (3) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 Adult retinal GGGAAGCCAG (6) 11.1 0.0111 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal TTTCTTTGGT (3) 1.9 0.0019 ONL CCAGGACCCT 3.8 0.0038 ONL GCTGAAGCTG (2) 3.8 0.0038 ONL GGGAAGCCAG (6) 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL GACACAACAA (3) 1.9 0.0019