Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22657	Krt2-5	keratin complex 2, basic, gene 5	15	15 58.79 cM	110308
Gene Ontology	cellular morphogenesis | cytoskeleton organization and biogenesis | epidermal differentiation | intermediate filament | protein binding | structural constituent of cytoskeleton
Human Homolog	KRT5[keratin 5 (epidermolysis bullosa simplex, Dowling-Meara/Kobner/Weber-Cockayne types)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGGACCTGG (2) GGGAAGCCAG TTTCTTTGGT TTTTTTTTTT (2) 31.1 0.0311 Cb medulloblastoma GACACAACAA GGGAAGCCAG TTTCTTTGGT TTTTTTTTTT (2) 16.1 0.0161 P8 GC+1d culture GCTGAAGCTG GGGAAGCCAG TTTCTTTGGT TTTTTTTTTT (2) 29.7 0.0297 P8 GC+SHH+1d culture GCTGAAGCTG GGGAAGCCAG TTTCTTTGGT TTTTTTTTTT (2) 24.6 0.0246 3T3 fibroblasts GGGAAGCCAG 10.5 0.0105 E15 cortex GCTGAAGCTG GCTGCTGGAG GGGAAGCCAG TTTTTTTTTT (2) 29.6 0.0296 P1 cortex GGGAAGCCAG TTTCTTTGGT TTTTTTTTTT (2) 31.8 0.0318 Hypothalamus GGGAAGCCAG TTTCTTTGGT TTTTTTTTTT (2) 12.6 0.0126 E12.5 retina GGGAAGCCAG TTTTTTTTTT (2) 16.9 0.0169 E14.5 retina CAGGACCTGG (2) GCTGAAGCTG GGGAAGCCAG TTTTTTTTTT (2) 47.3 0.0473 E16.5 retina CCAGGACCCT GGGAAGCCAG TTTCTTTGGT TTTTTTTTTT (2) 38 0.038 E18.5 retina GGGAAGCCAG TTTCTTTGGT TTTTTTTTTT (2) 23.6 0.0236 P0.5 retina GCTGAAGCTG GGGAAGCCAG TTTCTTTGGT TTTTTTTTTT (2) 27.5 0.0275 P2.5 retina GCTGCTGGAG GGGAAGCCAG TTTCTTTGGT TTTTTTTTTT (2) 26.4 0.0264 P4.5 retina GACACAACAA GCTGAAGCTG GGGAAGCCAG TTTTTTTTTT (2) 25.8 0.0258 P6.5 retina CCAGGACCCT GGGAAGCCAG TTTCTTTGGT TTTTTTTTTT (2) 28.3 0.0283 P10.5 crx- retina CAGGACCTGG (2) GCTGAAGCTG GGGAAGCCAG 18.7 0.0187 P10.5 crx+ retina GGGAAGCCAG TTTCTTTGGT TTTTTTTTTT (2) 26.8 0.0268 Adult retinal GGGAAGCCAG TTTCTTTGGT TTTTTTTTTT (2) 20.4 0.0204 ONL CCAGGACCCT GACACAACAA GCTGAAGCTG GGGAAGCCAG TTTTTTTTTT (2) 17.1 0.0171