Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22699	Sepp1	selenoprotein P, plasma, 1	15	15 5.9 cM	20363
Gene Ontology	brain development | extracellular | extracellular space | growth | locomotory behavior | post-embryonic development | selenium binding | sexual reproduction
Human Homolog	SEPP1[selenoprotein P, plasma, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGTGCAACT GAAGCCAACC GAATATGGAA (2) TATCTGTGCA TATGTGTGCA (3) 45.6 0.0456 Cb medulloblastoma CAGTGCAACT TATCTGTGCA TATGTGTGCA (3) 27.8 0.0278 P8 GC+1d culture CAGTGCAACT GAAGCCAACC GAATATGGAA (2) TATCTGTGCA TTTCTGGCTC 10.2 0.0102 P8 GC+SHH+1d culture CTGACAGTGG GAAGCCAACC GAATATGGAA (2) 3.6 0.0036 3T3 fibroblasts CAGTGCAACT CTGACAGTGG TATCTGTGCA 14 0.014 P1 cortex TATGTGTGCA (3) 4.5 0.0045 Hypothalamus CAGTGCAACT CTGACAGTGG GAAGCCAACC TATCTGTGCA TATGTGTGCA (3) TTTCTGGCTC 48.8 0.0488 E12.5 retina GAATATGGAA (2) GGTTTAGAAT (2) TATGTGTGCA (3) 9.5 0.0095 E14.5 retina GAATATGGAA (2) TATGTGTGCA (3) TGTGGAGGTT 9 0.009 E16.5 retina TATGTGTGCA (3) TGTGGAGGTT 3.6 0.0036 E18.5 retina TATGTGTGCA (3) 1.8 0.0018 P0.5 retina GAATATGGAA (2) GGGCAGAGCA (2) TATCTGTGCA TATGTGTGCA (3) 13.7 0.0137 P2.5 retina GAATATGGAA (2) TATGTGTGCA (3) 5.3 0.0053 P4.5 retina TATGTGTGCA (3) 2 0.002 P6.5 retina CAGTGCAACT CTGACAGTGG TATCTGTGCA 5.1 0.0051 P10.5 crx- retina GAATATGGAA (2) GGTTTAGAAT (2) TATGTGTGCA (3) 9.4 0.0094 P10.5 crx+ retina CAGTGCAACT GAATATGGAA (2) GGTTTAGAAT (2) TATCTGTGCA TATGTGTGCA (3) 9.5 0.0095 Adult retinal GAAGCCAACC GAATATGGAA (2) TATCTGTGCA TATGTGTGCA (3) TTTCTGGCTC 9.5 0.0095 ONL GAATATGGAA (2) GGGCAGAGCA (2) TGTGGAGGTT TTTCTGGCTC 7.6 0.0076