Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.226994	4930418P06Rik	RIKEN cDNA 4930418P06 gene	1		76867
Gene Ontology	extracellular space | integral to membrane
Human Homolog	DKFZp547E052[hypothetical protein DKFZp547E052]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CCTTTCCCTT (7) 19.6 0.0196 P8 Cb GC GTGGCACACA (30) 6.5 0.0065 P8 Cb GC TACAAGCTAG (2) 1.6 0.0016 P8 Cb GC TCTTCCAGAA (2) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma GTGGCACACA (30) 11.6 0.0116 Cb medulloblastoma TCTTCCAGAA (2) 6.9 0.0069 Cb medulloblastoma CCTTTCCCTT (7) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CCTTTCCCTT (7) 14.8 0.0148 P8 GC+1d culture GTGGCACACA (30) 13.7 0.0137 P8 GC+1d culture TACAAGCTAG (2) 2.3 0.0023 P8 GC+1d culture TCTTCCAGAA (2) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CCTTTCCCTT (7) 16.4 0.0164 P8 GC+SHH+1d culture GTGGCACACA (30) 2.3 0.0023 P8 GC+SHH+1d culture TACAAGCTAG (2) 1.2 0.0012 P8 GC+SHH+1d culture TCTTCCAGAA (2) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts GTGGCACACA (30) 14 0.014 3T3 fibroblasts CCTTTCCCTT (7) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GTGGCACACA (30) 24.7 0.0247 E15 cortex CCTTTCCCTT (7) 9.9 0.0099 E15 cortex TCTTCCAGAA (2) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex CCTTTCCCTT (7) 13.6 0.0136 P1 cortex GTGGCACACA (30) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GTGGCACACA (30) 7.2 0.0072 Hypothalamus CCTTTCCCTT (7) 3.6 0.0036 Hypothalamus TACAAGCTAG (2) 3.6 0.0036 Hypothalamus TCTTCCAGAA (2) 3.6 0.0036 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CCTTTCCCTT (7) 16.9 0.0169 E12.5 retina GTGGCACACA (30) 11.3 0.0113 E12.5 retina TACAAGCTAG (2) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina GTGGCACACA (30) 18.2 0.0182 E14.5 retina CCTTTCCCTT (7) 3.6 0.0036 E14.5 retina TCTTCCAGAA (2) 3.6 0.0036 E14.5 retina TACAAGCTAG (2) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GTGGCACACA (30) 9.1 0.0091 E16.5 retina CCTTTCCCTT (7) 7.2 0.0072 E16.5 retina TCTTCCAAAA (5) 3.6 0.0036 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina GTGGCACACA (30) 5.5 0.0055 E18.5 retina CCTTTCCCTT (7) 3.6 0.0036 E18.5 retina TACAAGCTAG (2) 3.6 0.0036 E18.5 retina TCTTCCAGAA (2) 3.6 0.0036 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina CCTTTCCCTT (7) 11.8 0.0118 P0.5 retina GTGGCACACA (30) 11.8 0.0118 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina GTGGCACACA (30) 17.6 0.0176 P2.5 retina CCTTTCCCTT (7) 15.8 0.0158 P2.5 retina TACAAGCTAG (2) 3.5 0.0035 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina GTGGCACACA (30) 11.9 0.0119 P4.5 retina CCTTTCCCTT (7) 5.9 0.0059 P4.5 retina GAGTCTAAGC (2) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GTGGCACACA (30) 26.7 0.0267 P6.5 retina CCTTTCCCTT (7) 10 0.01 P6.5 retina TACAAGCTAG (2) 5 0.005 P6.5 retina TCTTCCAGAA (2) 3.3 0.0033 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina GTGGCACACA (30) 13 0.013 P10.5 crx- retina CCTTTCCCTT (7) 7.4 0.0074 P10.5 crx- retina TCTTCCAGAA (2) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GTGGCACACA (30) 7.7 0.0077 P10.5 crx+ retina CCTTTCCCTT (7) 3.8 0.0038 P10.5 crx+ retina GAGTCTAAGC (2) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CCTTTCCCTT (7) 5.6 0.0056 Adult retinal GTGGCACACA (30) 5.6 0.0056 Adult retinal TACAAGCTAG (2) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GTGGCACACA (30) 24.9 0.0249 ONL TACAAGCTAG (2) 5.7 0.0057 ONL TCTTCCAGAA (2) 1.9 0.0019