Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22708	Serpinh1	serine (or cysteine) proteinase inhibitor, clade H, member 1	7		12406
Gene Ontology	endopeptidase inhibitor activity | endoplasmic reticulum | extracellular space | heat shock protein activity | protein binding | protein folding | response to heat | response to unfolded protein | serine-type endopeptidase inhibitor activity
Human Homolog	SERPINH1[serine (or cysteine) proteinase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)] | SERPINH1[serine (or cysteine) proteinase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 197 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) AACCTTTGTG AACTTTTGTT (2) ACCTGCAAAA CGCCTCTCTC CTCACACAAA GAACTTATGT GCCTGTGGCC GTGAAAAAAA (2) GTGACAAAAA (3) TCCTAACTTA (2) 249.6 0.2496 Cb medulloblastoma AAAAAAAAAA (2) AACTTTTGTT (2) ACCTGCAAAA GAACTTATGT GCCTGTGGCC GGGAAGGGGC (2) GTGAAAAAAA (2) GTGACAAAAA (3) TCCTAACTTA (2) 869.3 0.8693 P8 GC+1d culture AAAAAAAAAA (2) AACCTTTGTG AACTTTTGTT (2) ACCTGCAAAA CCTGCCCTAG CGCCTCTCTC GAACTTATGT GAGCCCAGAT GCAGCCAGAT GCCTGTGGCC GGGAACCCCT GGGCCCAAGC (3) GTGAAAAAAA (2) GTGGACCCCG (2) TCCTAACTTA (2) 283.8 0.2838 P8 GC+SHH+1d culture AAAAAAAAAA (2) AACTTTTGTT (2) ACCTGCAAAA CGCCTCTCTC GAACTTATGT GCAGCCAGAT GCCTGTGGCC GGGAAGGGGC (2) GTGAAAAAAA (2) GTGACAAAAA (3) TCCTAACTTA (2) TCTGGGAAGA (2) 338.4 0.3384 3T3 fibroblasts AAAAAAAAAA (2) AACCTTTGTG AACTTTTGTT (2) CCCCCACCAC (2) CGCCTCTCTC GAACTTATGT GCCTGTGGCC GGGAAGGGGC (2) TGGTGCACAC 185.6 0.1856 E15 cortex AAAAAAAAAA (2) ACCTGCAAAA CCCCCACCAC (2) CCTGCCCTAG CGCCTCTCTC GAACTTATGT GCCTGTGGCC GGCAAAGCCC (2) TCCTAACTTA (2) 291.9 0.2919 P1 cortex AAAAAAAAAA (2) CGCCTCTCTC GAACTTATGT GCCTGTGGCC GGGAACCCCT GGGAAGGGGC (2) TCCTAACTTA (2) 281.6 0.2816 Hypothalamus AAAAAAAAAA (2) AACTTTTGTT (2) ACCTGCAAAA GAACTTATGT GTGAAAAAAA (2) 146.7 0.1467 E12.5 retina AAAAAAAAAA (2) AACTTTTGTT (2) GAACTTATGT GAGCCCAGAT GCCTGTGGCC GGGAACCCCT GTGAAAAAAA (2) GTGACAAAAA (3) TCCTAACTTA (2) 206.6 0.2066 E14.5 retina AAAAAAAAAA (2) AACTTTTGTT (2) GAACTTATGT GCAGCCAGAT GCCTGTGGCC GGCAAAGCCC (2) GGGAACCCCT GTGAAAAAAA (2) GTGACAAAAA (3) 136.5 0.1365 E16.5 retina AAAAAAAAAA (2) AACTTTTGTT (2) ACCTGCAAAA GAACTTATGT GAGCCCAGAT GCAGCCAGAT GCCTGTGGCC GGCAAAGCCC (2) GGGAACCCCT GTGAAAAAAA (2) TCCTAACTTA (2) 108.5 0.1085 E18.5 retina AAAAAAAAAA (2) AACTTTTGTT (2) CGCCTCTCTC CTCACACAAA GAACTTATGT GCAGCCAGAT GCCTGTGGCC GGCAAAGCCC (2) GGGAACCCCT GTGAAAAAAA (2) 432.8 0.4328 P0.5 retina AAAAAAAAAA (2) AACTTTTGTT (2) ACCTGCAAAA GAACTTATGT GAGCCCAGAT GCCTGTGGCC GGGAACCCCT GGGAAGGGGC (2) GGGCCCAAGC (3) GTGAAAAAAA (2) GTGGACCCCG (2) 194.6 0.1946 P2.5 retina AAAAAAAAAA (2) AACTTTTGTT (2) ACCTGCAAAA CCTGCCCTAG GAACTTATGT GCCTGTGGCC GGGAACCCCT GGGAAGGGGC (2) GTGAAAAAAA (2) GTGACAAAAA (3) TCCTAACTTA (2) TCTGGGAAGA (2) 383.8 0.3838 P4.5 retina AAAAAAAAAA (2) AACTTTTGTT (2) ACCTGCAAAA CCTGCCCTAG CGCCTCTCTC CTCACACAAA GAACTTATGT GCCTGTGGCC GGGAACCCCT GTGAAAAAAA (2) GTGACAAAAA (3) GTGGACCCCG (2) TCTGGGAAGA (2) 360.8 0.3608 P6.5 retina AAAAAAAAAA (2) ACCTGCAAAA CTCACACAAA GAACTTATGT GCCTGTGGCC GGCAAAGCCC (2) GTGAAAAAAA (2) GTGGACCCCG (2) TGGTGCACAC 303.5 0.3035 P10.5 crx- retina AAAAAAAAAA (2) AACTTTTGTT (2) GAACTTATGT GCCTGTGGCC GGCAAAGCCC (2) GTGAAAAAAA (2) TCCTAACTTA (2) TCTGGGAAGA (2) 85.5 0.0855 P10.5 crx+ retina AAAAAAAAAA (2) AACTTTTGTT (2) ACCTGCAAAA CCTGCCCTAG GAACTTATGT GCCTGTGGCC GGGAACCCCT GTGAAAAAAA (2) GTGACAAAAA (3) GTGGACCCCG (2) TCCTAACTTA (2) 144 0.144 Adult retinal AAAAAAAAAA (2) AACTTTTGTT (2) ACCTGCAAAA CCTGCCCTAG GAACTTATGT GCCTGTGGCC GGGAACCCCT GTGAAAAAAA (2) TGGTGCACAC 74.4 0.0744 ONL AAAAAAAAAA (2) AACTTTTGTT (2) GAACTTATGT GCCTGTGGCC GTGAAAAAAA (2) TCCTAACTTA (2) TCTGGGAAGA (2) TGGTGCACAC 132 0.132