Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2277	Ctsh	cathepsin H	9	9 50.0 cM	13036
Gene Ontology	cathepsin H activity | cysteine-type endopeptidase activity | cysteine-type peptidase activity | extracellular space | hydrolase activity | lysosome | peptidase activity | proteolysis and peptidolysis
Human Homolog	CTSH[cathepsin H]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCTCCCCAC (3) 13.1 0.0131 P8 Cb GC TACTGGGAGC 4.9 0.0049 P8 Cb GC GTGCCAAGGA (4) 3.3 0.0033 P8 Cb GC AGAACTGGCC (4) 1.6 0.0016 P8 Cb GC CTGCTGGAGA (6) 1.6 0.0016 P8 Cb GC GGATGAAAAA (9) 1.6 0.0016 P8 Cb GC TGTGGTCTGG (3) 1.6 0.0016 Cb medulloblastoma GTGCCAAGGA (4) 9.2 0.0092 Cb medulloblastoma CAGTCCTGGC (5) 2.3 0.0023 Cb medulloblastoma TGTGGTCTGG (3) 2.3 0.0023 Cb medulloblastoma TTCTCCCCAC (3) 2.3 0.0023 P8 GC+1d culture TTCTCCCCAC (3) 3.4 0.0034 P8 GC+1d culture GCTGCAAAGG 2.3 0.0023 P8 GC+1d culture GCTGCCCGGC (5) 2.3 0.0023 P8 GC+1d culture TACTGGGAGC 2.3 0.0023 P8 GC+1d culture AGAACTGGCC (4) 1.1 0.0011 P8 GC+1d culture GGATGAAAAA (9) 1.1 0.0011 P8 GC+1d culture GTGCCAAGGA (4) 1.1 0.0011 P8 GC+SHH+1d culture TTCTCCCCAC (3) 16.4 0.0164 P8 GC+SHH+1d culture GTGCCAAGGA (4) 7 0.007 P8 GC+SHH+1d culture TACTGGGAGC 2.3 0.0023 P8 GC+SHH+1d culture GCTGCAAAGG 1.2 0.0012 P8 GC+SHH+1d culture GCTGCCAAGA (7) 1.2 0.0012 P8 GC+SHH+1d culture TGTGGCCTGG (7) 1.2 0.0012 3T3 fibroblasts GCTGCCCGGC (5) 3.5 0.0035 E15 cortex GTGCCAAGGA (4) 4.9 0.0049 P1 cortex GTGCCAAGGA (4) 9.1 0.0091 P1 cortex TGTGGCCTGG (7) 4.5 0.0045 Hypothalamus CAGATTCAAA (3) 7.2 0.0072 Hypothalamus TACTGGGAGC 7.2 0.0072 Hypothalamus GTGCCAAGGA (4) 5.4 0.0054 Hypothalamus CTGCTGGAGA (6) 1.8 0.0018 Hypothalamus GCTGCCCGGC (5) 1.8 0.0018 E12.5 retina TTCTCCCCAC (3) 15 0.015 E12.5 retina GTGCCAAGGA (4) 3.8 0.0038 E14.5 retina TTCTCCCCAC (3) 16.4 0.0164 E14.5 retina GTGCCAAGGA (4) 5.5 0.0055 E14.5 retina AGAACTGGCC (4) 1.8 0.0018 E14.5 retina CAGTCCTGGG (4) 1.8 0.0018 E14.5 retina GCTGCCCGGC (5) 1.8 0.0018 E16.5 retina TTCTCCCCAC (3) 12.7 0.0127 E16.5 retina CTGCTGGAGA (6) 3.6 0.0036 E16.5 retina GCTGCAAAGG 3.6 0.0036 E16.5 retina GTGCCAAGGA (4) 1.8 0.0018 E18.5 retina TTCTCCCCAC (3) 14.6 0.0146 E18.5 retina GTGCCAAGGA (4) 9.1 0.0091 E18.5 retina GGATGAAAAA (9) 1.8 0.0018 E18.5 retina TACTGGGAGC 1.8 0.0018 P0.5 retina TTCTCCCCAC (3) 19.6 0.0196 P0.5 retina CAGTCCTGGG (4) 2 0.002 P0.5 retina GCTGCCAAGA (7) 2 0.002 P2.5 retina GTGCCAAGGA (4) 10.6 0.0106 P2.5 retina TTCTCCCCAC (3) 10.6 0.0106 P2.5 retina CAGATTCAAA (3) 1.8 0.0018 P2.5 retina CTGCTGGAGA (6) 1.8 0.0018 P4.5 retina TTCTCCCCAC (3) 5.9 0.0059 P4.5 retina CAGATTCAAA (3) 4 0.004 P4.5 retina GTGCCAAGGA (4) 4 0.004 P4.5 retina AGAACTGGCC (4) 2 0.002 P4.5 retina GCTGCCAAGA (7) 2 0.002 P4.5 retina GCTGCCCGGC (5) 2 0.002 P6.5 retina GTGCCAAGGA (4) 5 0.005 P6.5 retina CAGATTCAAA (3) 3.3 0.0033 P6.5 retina GCTGCCCGGC (5) 1.7 0.0017 P6.5 retina TTCTCCCCAC (3) 1.7 0.0017 P10.5 crx- retina GTGCCAAGGA (4) 18.6 0.0186 P10.5 crx- retina GCTGCCCGGC (5) 3.7 0.0037 P10.5 crx- retina CAGATTCAAA (3) 1.9 0.0019 P10.5 crx- retina TACTGGGAGC 1.9 0.0019 P10.5 crx+ retina GTGCCAAGGA (4) 17.3 0.0173 P10.5 crx+ retina TGTGGCCTGG (7) 3.8 0.0038 P10.5 crx+ retina CAGTCCTGGG (4) 1.9 0.0019 P10.5 crx+ retina GCTGCCCGGC (5) 1.9 0.0019 Adult retinal GTGCCAAGGA (4) 5.6 0.0056 Adult retinal TACTGGGAGC 1.9 0.0019 ONL GTGCCAAGGA (4) 7.7 0.0077 ONL CAGATTCAAA (3) 1.9 0.0019 ONL GGATGAAAAA (9) 1.9 0.0019 ONL TGTGGTCTGG (3) 1.9 0.0019