Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2277	Ctsh	cathepsin H	9	9 50.0 cM	13036
Gene Ontology	cathepsin H activity | cysteine-type endopeptidase activity | cysteine-type peptidase activity | extracellular space | hydrolase activity | lysosome | peptidase activity | proteolysis and peptidolysis
Human Homolog	CTSH[cathepsin H]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAACTGGCC (3) CTGCTGGAGA (2) GGATGAAAAA GTGCCAAGGA TACTGGGAGC TGTGGTCTGG (2) TTCTCCCCAC 27.7 0.0277 Cb medulloblastoma CAGTCCTGGC (2) GTGCCAAGGA TGTGGTCTGG (2) TTCTCCCCAC 16.1 0.0161 P8 GC+1d culture AGAACTGGCC (3) GCTGCAAAGG GCTGCCCGGC (2) GGATGAAAAA GTGCCAAGGA TACTGGGAGC TTCTCCCCAC 13.6 0.0136 P8 GC+SHH+1d culture GCTGCAAAGG GCTGCCAAGA (2) GTGCCAAGGA TACTGGGAGC TGTGGCCTGG (2) TTCTCCCCAC 29.3 0.0293 3T3 fibroblasts GCTGCCCGGC (2) 3.5 0.0035 E15 cortex GTGCCAAGGA 4.9 0.0049 P1 cortex GTGCCAAGGA TGTGGCCTGG (2) 13.6 0.0136 Hypothalamus CAGATTCAAA CTGCTGGAGA (2) GCTGCCCGGC (2) GTGCCAAGGA TACTGGGAGC 23.4 0.0234 E12.5 retina GTGCCAAGGA TTCTCCCCAC 18.8 0.0188 E14.5 retina AGAACTGGCC (3) CAGTCCTGGG (4) GCTGCCCGGC (2) GTGCCAAGGA TTCTCCCCAC 27.3 0.0273 E16.5 retina CTGCTGGAGA (2) GCTGCAAAGG GTGCCAAGGA TTCTCCCCAC 21.7 0.0217 E18.5 retina GGATGAAAAA GTGCCAAGGA TACTGGGAGC TTCTCCCCAC 27.3 0.0273 P0.5 retina CAGTCCTGGG (4) GCTGCCAAGA (2) TTCTCCCCAC 23.6 0.0236 P2.5 retina CAGATTCAAA CTGCTGGAGA (2) GTGCCAAGGA TTCTCCCCAC 24.8 0.0248 P4.5 retina AGAACTGGCC (3) CAGATTCAAA GCTGCCAAGA (2) GCTGCCCGGC (2) GTGCCAAGGA TTCTCCCCAC 19.9 0.0199 P6.5 retina CAGATTCAAA GCTGCCCGGC (2) GTGCCAAGGA TTCTCCCCAC 11.7 0.0117 P10.5 crx- retina CAGATTCAAA GCTGCCCGGC (2) GTGCCAAGGA TACTGGGAGC 26.1 0.0261 P10.5 crx+ retina CAGTCCTGGG (4) GCTGCCCGGC (2) GTGCCAAGGA TGTGGCCTGG (2) 24.9 0.0249 Adult retinal GTGCCAAGGA TACTGGGAGC 7.5 0.0075 ONL CAGATTCAAA GGATGAAAAA GTGCCAAGGA TGTGGTCTGG (2) 13.4 0.0134