Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.231450	Atxnl2	ataxin 2-like	7		233871
Gene Ontology	biological_process unknown | membrane | molecular_function unknown
Human Homolog	ATXN2L[ataxin 2-like]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTGGAGGGA (2) 3.3 0.0033 Cb medulloblastoma AGTGGAGGGA (2) 4.6 0.0046 P8 GC+1d culture AGTGGAGGGA (2) 1.1 0.0011 P8 GC+1d culture TCCAAACTGG (2) 1.1 0.0011 P8 GC+SHH+1d culture AGTGGAGGGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GAGGTCTCAG 1.2 0.0012 3T3 fibroblasts AGTGGAGGGA (2) 17.5 0.0175 3T3 fibroblasts GAGGTCTCAG 3.5 0.0035 3T3 fibroblasts TCCAAACTGG (2) 3.5 0.0035 P1 cortex AGTGGAGGGA (2) 4.5 0.0045 Hypothalamus AGTGGAGGGA (2) 3.6 0.0036 Hypothalamus GCAGGAGTAG 3.6 0.0036 Hypothalamus GAGGTCTCAG 1.8 0.0018 Hypothalamus TCCAAACTGG (2) 1.8 0.0018 E12.5 retina AGTGGAGGGA (2) 5.6 0.0056 E12.5 retina GAGGTCTCAG 1.9 0.0019 E14.5 retina AGTGGAGGGA (2) 1.8 0.0018 E14.5 retina GCAGGAGTAG 1.8 0.0018 E16.5 retina GAGGTCTCAG 7.2 0.0072 E16.5 retina GAAGAGCTGA (2) 5.4 0.0054 E16.5 retina AGTGGAGGGA (2) 3.6 0.0036 E18.5 retina AGTGGAGGGA (2) 1.8 0.0018 P0.5 retina AGTGGAGGGA (2) 15.7 0.0157 P0.5 retina TCCAAACTGG (2) 5.9 0.0059 P2.5 retina TCCAAACTGG (2) 1.8 0.0018 P4.5 retina GAGGTCTCAG 2 0.002 P6.5 retina AGTGGAGGGA (2) 5 0.005 P6.5 retina GAAGAGCTGA (2) 3.3 0.0033 P6.5 retina GAGGTCTCAG 1.7 0.0017 P6.5 retina TCCAAACTGG (2) 1.7 0.0017 P10.5 crx- retina AGTGGAGGGA (2) 11.1 0.0111 P10.5 crx- retina TCCAAACTGG (2) 5.6 0.0056 P10.5 crx- retina GAGGTCTCAG 3.7 0.0037 P10.5 crx- retina GAAGAGCTGA (2) 1.9 0.0019 P10.5 crx+ retina AGTGGAGGGA (2) 3.8 0.0038 P10.5 crx+ retina TCCAAACTGG (2) 3.8 0.0038 P10.5 crx+ retina GAAGAGCTGA (2) 1.9 0.0019 Adult retinal AGTGGAGGGA (2) 9.3 0.0093 Adult retinal TCCAAACTGG (2) 1.9 0.0019 ONL AGTGGAGGGA (2) 3.8 0.0038 ONL GAAGAGCTGA (2) 1.9 0.0019 ONL TCCAAACTGG (2) 1.9 0.0019