Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.231450	Atxnl2	ataxin 2-like	7		233871
Gene Ontology	biological_process unknown | membrane | molecular_function unknown
Human Homolog	ATXN2L[ataxin 2-like]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 99 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTGGAGGGA (5) 3.3 0.0033 P8 Cb GC GGGGGCCCCC (6) 1.6 0.0016 P8 Cb GC TGTTACCAGG (2) 1.6 0.0016 Cb medulloblastoma GTGACAAAAT (4) 9.2 0.0092 Cb medulloblastoma AGTGGAGGGA (5) 4.6 0.0046 Cb medulloblastoma TGAGTGTGTG (7) 2.3 0.0023 P8 GC+1d culture GTGACAAAAT (4) 4.6 0.0046 P8 GC+1d culture GCACGAGCTC (2) 2.3 0.0023 P8 GC+1d culture GGGGGCCCCC (6) 2.3 0.0023 P8 GC+1d culture AGTGGAGGGA (5) 1.1 0.0011 P8 GC+1d culture TCCAAACTGG (3) 1.1 0.0011 P8 GC+SHH+1d culture GTGACAAAAT (4) 5.9 0.0059 P8 GC+SHH+1d culture AGTGGAGGGA (5) 1.2 0.0012 P8 GC+SHH+1d culture GAGGTCTCAG (6) 1.2 0.0012 P8 GC+SHH+1d culture GCACGAGCTC (2) 1.2 0.0012 P8 GC+SHH+1d culture GGGGGCCCCC (6) 1.2 0.0012 3T3 fibroblasts AGTGGAGGGA (5) 17.5 0.0175 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GAGGTCTCAG (6) 3.5 0.0035 3T3 fibroblasts TCCAAACTGG (3) 3.5 0.0035 3T3 fibroblasts TGTTACCAGG (2) 3.5 0.0035 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex AGTGGAGGGA (5) 4.5 0.0045 P1 cortex GTGACAAAAT (4) 4.5 0.0045 Hypothalamus AGTGGAGGGA (5) 3.6 0.0036 Hypothalamus GCAGGAGTAG 3.6 0.0036 Hypothalamus GAGGTCTCAG (6) 1.8 0.0018 Hypothalamus GCACGAGCTC (2) 1.8 0.0018 Hypothalamus GGGGGCCCCC (6) 1.8 0.0018 Hypothalamus TCCAAACTGG (3) 1.8 0.0018 Hypothalamus TGTTACCAGG (2) 1.8 0.0018 E12.5 retina GCACGAGCTC (2) 9.4 0.0094 E12.5 retina AGTGGAGGGA (5) 5.6 0.0056 E12.5 retina GTGACAAAAT (4) 3.8 0.0038 E12.5 retina GAGGTCTCAG (6) 1.9 0.0019 E12.5 retina TGAGTGTGTG (7) 1.9 0.0019 E14.5 retina GCACGAGCTC (2) 7.3 0.0073 E14.5 retina GTGACAAAAT (4) 5.5 0.0055 E14.5 retina AGTGGAGGGA (5) 1.8 0.0018 E14.5 retina GCAGGAGTAG 1.8 0.0018 E14.5 retina TGAGTGTGTG (7) 1.8 0.0018 E16.5 retina GAGGTCTCAG (6) 7.2 0.0072 E16.5 retina GAAGAGCTGA (2) 5.4 0.0054 E16.5 retina AGTGGAGGGA (5) 3.6 0.0036 E16.5 retina GTGACAAAAT (4) 1.8 0.0018 E18.5 retina GGGGGCCCCC (6) 3.6 0.0036 E18.5 retina AGTGGAGGGA (5) 1.8 0.0018 E18.5 retina GCACGAGCTC (2) 1.8 0.0018 E18.5 retina GGTGGGAGGG (5) 1.8 0.0018 E18.5 retina TGTTACCAGG (2) 1.8 0.0018 P0.5 retina AGTGGAGGGA (5) 15.7 0.0157 P0.5 retina TCCAAACTGG (3) 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TGTTACCAGG (2) 3.9 0.0039 P2.5 retina GCACGAGCTC (2) 3.5 0.0035 P2.5 retina GTGACAAAAT (4) 3.5 0.0035 P2.5 retina GGGGGCCCCC (6) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TCCAAACTGG (3) 1.8 0.0018 P2.5 retina TGTTACCAGG (2) 1.8 0.0018 P4.5 retina GCACGAGCTC (2) 7.9 0.0079 P4.5 retina TGTTACCAGG (2) 4 0.004 P4.5 retina GAGGTCTCAG (6) 2 0.002 P4.5 retina GGGGGCCCCC (6) 2 0.002 P4.5 retina GGTGGGAGGG (5) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina GTGACAAAAT (4) 2 0.002 P6.5 retina AGTGGAGGGA (5) 5 0.005 P6.5 retina GCACGAGCTC (2) 5 0.005 P6.5 retina GAAGAGCTGA (2) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GAGGTCTCAG (6) 1.7 0.0017 P6.5 retina GTGACAAAAT (4) 1.7 0.0017 P6.5 retina TCCAAACTGG (3) 1.7 0.0017 P10.5 crx- retina AGTGGAGGGA (5) 11.1 0.0111 P10.5 crx- retina TCCAAACTGG (3) 5.6 0.0056 P10.5 crx- retina GAGGTCTCAG (6) 3.7 0.0037 P10.5 crx- retina GAAGAGCTGA (2) 1.9 0.0019 P10.5 crx- retina GGTGGGAGGG (5) 1.9 0.0019 P10.5 crx- retina GTGACAAAAT (4) 1.9 0.0019 P10.5 crx- retina TGAGTGTGTG (7) 1.9 0.0019 P10.5 crx+ retina GTGACAAAAT (4) 5.8 0.0058 P10.5 crx+ retina AGTGGAGGGA (5) 3.8 0.0038 P10.5 crx+ retina TCCAAACTGG (3) 3.8 0.0038 P10.5 crx+ retina GAAGAGCTGA (2) 1.9 0.0019 P10.5 crx+ retina GCACGAGCTC (2) 1.9 0.0019 P10.5 crx+ retina TGAGTGTGTG (7) 1.9 0.0019 Adult retinal AGTGGAGGGA (5) 9.3 0.0093 Adult retinal GCACGAGCTC (2) 1.9 0.0019 Adult retinal GGGGGCCCCC (6) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal GTGACAAAAT (4) 1.9 0.0019 Adult retinal TCCAAACTGG (3) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AGTGGAGGGA (5) 3.8 0.0038 ONL GAAGAGCTGA (2) 1.9 0.0019 ONL GTGACAAAAT (4) 1.9 0.0019 ONL TCCAAACTGG (3) 1.9 0.0019 ONL TGTTACCAGG (2) 1.9 0.0019