Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.235300	Lin7c	lin 7 homolog c (C. elegans)	2	2 61.0 cM	22343
Human Homolog	LIN7C[lin-7 homolog C (C. elegans)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 114 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) AAACTTCAGA CCTTTAATTC (3) GAACCTTTTT (2) GGACCTTTTT (4) TCCAGGTTAC TGTTTTTAAA (2) 216.8 0.2168 Cb medulloblastoma AAAAAAAAAA (2) AAACTTCAGA CCTTTAATTC (3) TCAGGAACCA TGTTTTTAAA (2) 818.6 0.8186 P8 GC+1d culture AAAAAAAAAA (2) AAACTTCAGA CTAGCTTCCT GACTTTCTGG (2) GTTTTTAAAA (2) TCCAGGTTAC TGTTTTTAAA (2) 215.6 0.2156 P8 GC+SHH+1d culture AAAAAAAAAA (2) AAACTTCAGA CCTTTAATTC (3) CTAGCTTCCT GAACCTTTTT (2) GACTTTCTGG (2) GTTTTTAAAA (2) TCCAGTTACA TGAACAGTGG (2) TGTTTTTAAA (2) 309.1 0.3091 3T3 fibroblasts AAAAAAAAAA (2) CCTTTAATTC (3) 35 0.035 E15 cortex AAAAAAAAAA (2) GGACCTTTTT (4) 222.7 0.2227 P1 cortex AAAAAAAAAA (2) AAACTTCAGA CCTTTAATTC (3) GAACCTTTTT (2) GCTTTTAAAA (3) GGACCTTTTT (4) GTTTTTAAAA (2) 290.7 0.2907 Hypothalamus AAAAAAAAAA (2) GGACCTTTTT (4) GTTTTTAAAA (2) TGTTTCTAAA 128.6 0.1286 E12.5 retina AAAAAAAAAA (2) AAACTTCAGA CCTTTAATTC (3) GAACCTTTTT (2) TGAACAGTGG (2) 161.5 0.1615 E14.5 retina AAAAAAAAAA (2) AAACTTCAGA CCTTTAATTC (3) TCAGGAACCA 111.1 0.1111 E16.5 retina AAAAAAAAAA (2) AAACTTCAGA CCTTTAATTC (3) GCTTTTAAAA (3) GTTTTTAAAA (2) TGTTTCTAAA 57.9 0.0579 E18.5 retina AAAAAAAAAA (2) AAACTTCAGA CCTTTAATTC (3) CTAGCTTCCT GCTTTTAAAA (3) TCCAGGTTAC TGTTTCTAAA 389.2 0.3892 P0.5 retina AAAAAAAAAA (2) AAACTTCAGA CCTTTAATTC (3) GAACCTTTTT (2) GTTTTTAAAA (2) TCCAGTTACA 141.4 0.1414 P2.5 retina AAAAAAAAAA (2) AAACTTCAGA CCACTGCAAA CCTTTAATTC (3) CTAGCTTCCT GCTTTTAAAA (3) TCCAGTTAAA TCCAGTTACA TGTTTTTAAA (2) 352.3 0.3523 P4.5 retina AAAAAAAAAA (2) AAACTTCAGA CCTTTAATTC (3) GTTTTTAAAA (2) TGTTTCTAAA TGTTTTTAAA (2) 307.1 0.3071 P6.5 retina AAAAAAAAAA (2) AAACTTCAGA CCTTTAATTC (3) CTAGCTTCCT TGTTTTTAAA (2) 281.8 0.2818 P10.5 crx- retina AAAAAAAAAA (2) AAACTTCAGA CCTTTAATTC (3) CTAGCTTCCT 54 0.054 P10.5 crx+ retina AAAAAAAAAA (2) AAACTTCAGA CCACTGCAAA CTAGCTTCCT GACTTTCTGG (2) GCTTTTAAAA (3) TGTTTTTAAA (2) 113.2 0.1132 Adult retinal AAAAAAAAAA (2) CCTTTAATTC (3) GACTTTCTGG (2) TCAGGAACCA TGAACAGTGG (2) 65 0.065 ONL AAAAAAAAAA (2) AAACTTCAGA CCACTGCAAA CCTTTAATTC (3) TCCAGTTAAA TGTTTTTAAA (2) 120.5 0.1205