Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.236256	Brca2	breast cancer 2	5	5 84.0 cM	12190
Gene Ontology	cytoplasm | DNA repair | nucleic acid binding | nucleus | protein binding | response to DNA damage stimulus
Human Homolog	BRCA2[breast cancer 2, early onset]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGACAGCA (2) CAAATAAAGA (2) CCTTTAATCC (3) CTCCCACCTT (3) 58.7 0.0587 Cb medulloblastoma CCTTTAATCC (3) CTCACAGAGA (2) CTCCCACCTT (3) TACCCAATAT TCACAAGAAA 62.4 0.0624 P8 GC+1d culture CAGCCTCCAC CCTTTAATCC (3) CTCACAGAGA (2) CTCCCACCTT (3) 44.5 0.0445 P8 GC+SHH+1d culture CAAATAAAGA (2) CAGCCTCCAC CCTTTAATCC (3) CTCCCACCTT (3) TCACAAGAAA 37.6 0.0376 3T3 fibroblasts CCTTTAATCC (3) CTCCCACCTT (3) 80.6 0.0806 E15 cortex CCTTTAATCC (3) CTCCCACCTT (3) 64.3 0.0643 P1 cortex AAGGACAGCA (2) CCTTTAATCC (3) 159 0.159 Hypothalamus CCTTTAATCC (3) CTCACAGAGA (2) CTCCCACCTT (3) 30.8 0.0308 E12.5 retina AAGGACAGCA (2) CCTTTAATCC (3) CTCCCACCTT (3) TACCCAATAT TCACAAGAAA 90.2 0.0902 E14.5 retina CCTTTAATCC (3) CTCACAGAGA (2) CTCCCACCTT (3) 134.9 0.1349 E16.5 retina CCTTTAATCC (3) CTCACAGAGA (2) CTCCCACCTT (3) TCACAAGAAA 81.5 0.0815 E18.5 retina CCTTTAATCC (3) CTCCCACCTT (3) 38.2 0.0382 P0.5 retina CAGCCTCCAC CCTTTAATCC (3) CTCACAGAGA (2) CTCCCACCTT (3) 90.3 0.0903 P2.5 retina CCTTTAATCC (3) CTCCCACCTT (3) 86.2 0.0862 P4.5 retina CCTTTAATCC (3) CTCCCACCTT (3) 81.2 0.0812 P6.5 retina CCTTTAATCC (3) CTCCCACCTT (3) TCACAAGAAA 91.7 0.0917 P10.5 crx- retina CCTTTAATCC (3) CTCACAGAGA (2) CTCCCACCTT (3) TACCCAATAT 80 0.08 P10.5 crx+ retina CCTTTAATCC (3) CTCCCACCTT (3) 59.5 0.0595 Adult retinal CAAATAAAGA (2) CAGCCTCCAC CCTTTAATCC (3) CTCCCACCTT (3) TACCCAATAT 170.5 0.1705 ONL CCTTTAATCC (3) CTCCCACCTT (3) 99.6 0.0996