Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.236443	Fasn	fatty acid synthase	11	11 72.0 cM	14104
Gene Ontology	acyltransferase activity | alcohol dehydrogenase activity, zinc-dependent | biosynthesis | catalytic activity | cofactor binding | fatty acid biosynthesis | fatty-acid synthase activity | hydrolase activity | hydrolase activity, acting on ester bonds | lyase activity | oxidoreductase activity | transferase activity | zinc ion binding
Human Homolog	FASN[fatty acid synthase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 155 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACTGCCCCT (4) 16.3 0.0163 P8 Cb GC ATGCAGGGCC (3) 3.3 0.0033 P8 Cb GC CTCTTGGTCT (2) 3.3 0.0033 P8 Cb GC GAGTTCTCAG (5) 3.3 0.0033 P8 Cb GC TGGCAGTGGA (4) 3.3 0.0033 P8 Cb GC AAGCCACGCT 1.6 0.0016 P8 Cb GC GAGGAGGTGG (13) 1.6 0.0016 P8 Cb GC GATGAGAGGC 1.6 0.0016 P8 Cb GC TGGGGAAAAG (5) 1.6 0.0016 P8 Cb GC TGGGGAAGAT 1.6 0.0016 P8 Cb GC TGTCTGTCCA (5) 1.6 0.0016 Cb medulloblastoma ATGCAGGGCC (3) 4.6 0.0046 Cb medulloblastoma CTCTTGGTCT (2) 4.6 0.0046 Cb medulloblastoma TGGGGAAAAA (5) 4.6 0.0046 Cb medulloblastoma CCTTTAACTC (2) 2.3 0.0023 Cb medulloblastoma GCAGCTGTTG (5) 2.3 0.0023 Cb medulloblastoma GTGGCACGTG 2.3 0.0023 Cb medulloblastoma GTGGCTGCCA (6) 2.3 0.0023 Cb medulloblastoma TGGCAGTGGA (4) 2.3 0.0023 Cb medulloblastoma TGGGGAAAAG (5) 2.3 0.0023 Cb medulloblastoma TGTCTGTCCA (5) 2.3 0.0023 P8 GC+1d culture ATGCAGGGCC (3) 16 0.016 P8 GC+1d culture GACTGCCCCT (4) 11.4 0.0114 P8 GC+1d culture AAGCCACGCT 2.3 0.0023 P8 GC+1d culture GCTTCTCCCA (6) 2.3 0.0023 P8 GC+1d culture ATGCAGGGCA (6) 1.1 0.0011 P8 GC+1d culture CTCTTGGTCT (2) 1.1 0.0011 P8 GC+1d culture GATGAGAGGC 1.1 0.0011 P8 GC+1d culture GTGGCACGTG 1.1 0.0011 P8 GC+1d culture GTGGCTGCCA (6) 1.1 0.0011 P8 GC+SHH+1d culture ATGCAGGGCC (3) 18.7 0.0187 P8 GC+SHH+1d culture GACTGCCCCT (4) 9.4 0.0094 P8 GC+SHH+1d culture CTCTTGGTCT (2) 4.7 0.0047 P8 GC+SHH+1d culture AAGCCACGCT 2.3 0.0023 P8 GC+SHH+1d culture GAGTTCTCAG (5) 1.2 0.0012 P8 GC+SHH+1d culture GCTTCTCCCA (6) 1.2 0.0012 P8 GC+SHH+1d culture GTGGCACGTG 1.2 0.0012 3T3 fibroblasts GACTGCCCCT (4) 21 0.021 3T3 fibroblasts ATGCAGGGCC (3) 17.5 0.0175 3T3 fibroblasts AAGCCACGCT 3.5 0.0035 3T3 fibroblasts ATGCAGGGCA (6) 3.5 0.0035 3T3 fibroblasts CTTGGGCAGA (2) 3.5 0.0035 3T3 fibroblasts GTGGCACGTG 3.5 0.0035 E15 cortex ATGCAGGGCC (3) 29.7 0.0297 E15 cortex CTCTTGGTCT (2) 9.9 0.0099 E15 cortex AAGCCAGCTC 4.9 0.0049 E15 cortex ATGCAGGGCA (6) 4.9 0.0049 E15 cortex GACTGCCCCT (4) 4.9 0.0049 E15 cortex GAGTTCTCAG (5) 4.9 0.0049 E15 cortex GTGGCTGCCA (6) 4.9 0.0049 E15 cortex TGGGGAAAAG (5) 4.9 0.0049 E15 cortex TGGGGAAGAT 4.9 0.0049 P1 cortex ATGCAGGGCC (3) 13.6 0.0136 P1 cortex AAGCCAGCTC 9.1 0.0091 P1 cortex GACTGCCCCT (4) 9.1 0.0091 P1 cortex CTCTTGGTCT (2) 4.5 0.0045 Hypothalamus GACTGCCCCT (4) 3.6 0.0036 Hypothalamus GGGTGTGGAA (4) 3.6 0.0036 Hypothalamus TGGCAGTGGA (4) 3.6 0.0036 Hypothalamus TGTCTGTCCA (5) 3.6 0.0036 Hypothalamus AAGCCAGCTC 1.8 0.0018 Hypothalamus ATGCAGGGCA (6) 1.8 0.0018 Hypothalamus ATGCAGGGCC (3) 1.8 0.0018 Hypothalamus CTCTTGGTCT (2) 1.8 0.0018 Hypothalamus GAGGAGGTGG (13) 1.8 0.0018 Hypothalamus GTGGCACGTG 1.8 0.0018 E12.5 retina CTCTTGGTCT (2) 15 0.015 E12.5 retina GACTGCCCCT (4) 9.4 0.0094 E12.5 retina ATGCAGGGCC (3) 7.5 0.0075 E12.5 retina AAGCCAGCTC 1.9 0.0019 E12.5 retina CAGCAGTAGA (3) 1.9 0.0019 E12.5 retina CCTTTAACTC (2) 1.9 0.0019 E12.5 retina GAGTTCTCAG (5) 1.9 0.0019 E12.5 retina TGGGGAAAAG (5) 1.9 0.0019 E14.5 retina GACTGCCCCT (4) 7.3 0.0073 E14.5 retina CTCTTGGTCT (2) 5.5 0.0055 E14.5 retina TGTCTGTCCA (5) 5.5 0.0055 E14.5 retina AAGCCACGCT 1.8 0.0018 E14.5 retina ATGCAGGGCC (3) 1.8 0.0018 E14.5 retina GAGGAGGTGG (13) 1.8 0.0018 E14.5 retina GCTTCTCCCA (6) 1.8 0.0018 E14.5 retina TCAACAAGCA (2) 1.8 0.0018 E14.5 retina TGGGGAAAAA (5) 1.8 0.0018 E16.5 retina CTCTTGGTCT (2) 21.7 0.0217 E16.5 retina GACTGCCCCT (4) 21.7 0.0217 E16.5 retina ATGCAGGGCC (3) 18.1 0.0181 E16.5 retina GCTTCTCCCA (6) 3.6 0.0036 E16.5 retina AAGCCACGCT 1.8 0.0018 E16.5 retina GAGGAGGTGG (13) 1.8 0.0018 E16.5 retina GTGGCTGCCA (6) 1.8 0.0018 E18.5 retina CTCTTGGTCT (2) 14.6 0.0146 E18.5 retina GACTGCCCCT (4) 9.1 0.0091 E18.5 retina ATGCAGGGCC (3) 7.3 0.0073 E18.5 retina CAGCAGTAGA (3) 3.6 0.0036 E18.5 retina GCAGCTGTTG (5) 1.8 0.0018 E18.5 retina TGGGGAAAAA (5) 1.8 0.0018 P0.5 retina GACTGCCCCT (4) 23.6 0.0236 P0.5 retina ATGCAGGGCC (3) 15.7 0.0157 P0.5 retina CTCTTGGTCT (2) 9.8 0.0098 P0.5 retina TGGCAGTGGA (4) 3.9 0.0039 P0.5 retina AAGCCACGCT 2 0.002 P0.5 retina ATGCAGGGCA (6) 2 0.002 P0.5 retina TGGGGAAAAA (5) 2 0.002 P0.5 retina TGGGGAAGAT 2 0.002 P2.5 retina GACTGCCCCT (4) 8.8 0.0088 P2.5 retina CTCTTGGTCT (2) 5.3 0.0053 P2.5 retina ATGCAGGGCC (3) 1.8 0.0018 P2.5 retina CAGGCAGGAT (3) 1.8 0.0018 P2.5 retina GGGTGTGGAA (4) 1.8 0.0018 P2.5 retina GTGGCTGCCA (6) 1.8 0.0018 P2.5 retina TGGCAGTGGA (4) 1.8 0.0018 P4.5 retina CTCTTGGTCT (2) 9.9 0.0099 P4.5 retina ATGCAGGGCC (3) 4 0.004 P4.5 retina TGGGGAAAAG (5) 4 0.004 P4.5 retina GACTGCCCCT (4) 2 0.002 P4.5 retina GTGGCACGTG 2 0.002 P4.5 retina TGGCAGTGGA (4) 2 0.002 P6.5 retina CTCTTGGTCT (2) 13.3 0.0133 P6.5 retina ATGCAGGGCC (3) 5 0.005 P6.5 retina GACTGCCCCT (4) 5 0.005 P6.5 retina CCTTTAACTC (2) 3.3 0.0033 P6.5 retina AAGCCAGCTC 1.7 0.0017 P6.5 retina ATGCAGGGCA (6) 1.7 0.0017 P6.5 retina CAGGCAGGAT (3) 1.7 0.0017 P6.5 retina GTGGCACGTG 1.7 0.0017 P6.5 retina TGGCAGTGGA (4) 1.7 0.0017 P6.5 retina TGGGGAAAAA (5) 1.7 0.0017 P10.5 crx- retina ATGCAGGGCC (3) 7.4 0.0074 P10.5 crx- retina CTCTTGGTCT (2) 7.4 0.0074 P10.5 crx- retina GACTGCCCCT (4) 5.6 0.0056 P10.5 crx- retina AAGCCACGCT 1.9 0.0019 P10.5 crx- retina GATGAGAGGC 1.9 0.0019 P10.5 crx- retina GTGGCTGCCA (6) 1.9 0.0019 P10.5 crx- retina TGGCAGTGGA (4) 1.9 0.0019 P10.5 crx+ retina CTCTTGGTCT (2) 11.5 0.0115 P10.5 crx+ retina GACTGCCCCT (4) 9.6 0.0096 P10.5 crx+ retina ATGCAGGGCC (3) 7.7 0.0077 P10.5 crx+ retina CTTGGGCAGA (2) 1.9 0.0019 P10.5 crx+ retina GGGTGTGGAA (4) 1.9 0.0019 P10.5 crx+ retina TGGGGAAAAA (5) 1.9 0.0019 P10.5 crx+ retina TGGGGAAAAG (5) 1.9 0.0019 Adult retinal CTCTTGGTCT (2) 13 0.013 Adult retinal GACTGCCCCT (4) 9.3 0.0093 Adult retinal ATGCAGGGCA (6) 5.6 0.0056 Adult retinal GTGGCACGTG 3.7 0.0037 Adult retinal CCTTTAACTC (2) 1.9 0.0019 Adult retinal GAGGAGGTGG (13) 1.9 0.0019 Adult retinal GTGGCTGCCA (6) 1.9 0.0019 ONL CTCTTGGTCT (2) 3.8 0.0038 ONL GACTGCCCCT (4) 3.8 0.0038 ONL CAGGCAGGAT (3) 1.9 0.0019 ONL CTTGGGCAGA (2) 1.9 0.0019 ONL GCAGCTGTTG (5) 1.9 0.0019 ONL GGGTGTGGAA (4) 1.9 0.0019 ONL TGGGGAAAAA (5) 1.9 0.0019