Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.236443	Fasn	fatty acid synthase	11	11 72.0 cM	14104
Gene Ontology	acyltransferase activity | alcohol dehydrogenase activity, zinc-dependent | biosynthesis | catalytic activity | cofactor binding | fatty acid biosynthesis | fatty-acid synthase activity | hydrolase activity | hydrolase activity, acting on ester bonds | lyase activity | oxidoreductase activity | transferase activity | zinc ion binding
Human Homolog	FASN[fatty acid synthase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 155 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCCACGCT ATGCAGGGCC CTCTTGGTCT GACTGCCCCT (2) GAGGAGGTGG (2) GAGTTCTCAG (2) GATGAGAGGC TGGCAGTGGA (3) TGGGGAAAAG TGGGGAAGAT TGTCTGTCCA 39.1 0.0391 Cb medulloblastoma ATGCAGGGCC CCTTTAACTC CTCTTGGTCT GCAGCTGTTG (5) GTGGCACGTG GTGGCTGCCA TGGCAGTGGA (3) TGGGGAAAAA TGGGGAAAAG TGTCTGTCCA 29.9 0.0299 P8 GC+1d culture AAGCCACGCT ATGCAGGGCA (3) ATGCAGGGCC CTCTTGGTCT GACTGCCCCT (2) GATGAGAGGC GCTTCTCCCA (4) GTGGCACGTG GTGGCTGCCA 37.5 0.0375 P8 GC+SHH+1d culture AAGCCACGCT ATGCAGGGCC CTCTTGGTCT GACTGCCCCT (2) GAGTTCTCAG (2) GCTTCTCCCA (4) GTGGCACGTG 38.7 0.0387 3T3 fibroblasts AAGCCACGCT ATGCAGGGCA (3) ATGCAGGGCC CTTGGGCAGA GACTGCCCCT (2) GTGGCACGTG 52.5 0.0525 E15 cortex AAGCCAGCTC ATGCAGGGCA (3) ATGCAGGGCC CTCTTGGTCT GACTGCCCCT (2) GAGTTCTCAG (2) GTGGCTGCCA TGGGGAAAAG TGGGGAAGAT 73.9 0.0739 P1 cortex AAGCCAGCTC ATGCAGGGCC CTCTTGGTCT GACTGCCCCT (2) 36.3 0.0363 Hypothalamus AAGCCAGCTC ATGCAGGGCA (3) ATGCAGGGCC CTCTTGGTCT GACTGCCCCT (2) GAGGAGGTGG (2) GGGTGTGGAA (2) GTGGCACGTG TGGCAGTGGA (3) TGTCTGTCCA 25.2 0.0252 E12.5 retina AAGCCAGCTC ATGCAGGGCC CAGCAGTAGA (2) CCTTTAACTC CTCTTGGTCT GACTGCCCCT (2) GAGTTCTCAG (2) TGGGGAAAAG 41.4 0.0414 E14.5 retina AAGCCACGCT ATGCAGGGCC CTCTTGGTCT GACTGCCCCT (2) GAGGAGGTGG (2) GCTTCTCCCA (4) TCAACAAGCA TGGGGAAAAA TGTCTGTCCA 29.1 0.0291 E16.5 retina AAGCCACGCT ATGCAGGGCC CTCTTGGTCT GACTGCCCCT (2) GAGGAGGTGG (2) GCTTCTCCCA (4) GTGGCTGCCA 70.5 0.0705 E18.5 retina ATGCAGGGCC CAGCAGTAGA (2) CTCTTGGTCT GACTGCCCCT (2) GCAGCTGTTG (5) TGGGGAAAAA 38.2 0.0382 P0.5 retina AAGCCACGCT ATGCAGGGCA (3) ATGCAGGGCC CTCTTGGTCT GACTGCCCCT (2) TGGCAGTGGA (3) TGGGGAAAAA TGGGGAAGAT 61 0.061 P2.5 retina ATGCAGGGCC CAGGCAGGAT CTCTTGGTCT GACTGCCCCT (2) GGGTGTGGAA (2) GTGGCTGCCA TGGCAGTGGA (3) 23.1 0.0231 P4.5 retina ATGCAGGGCC CTCTTGGTCT GACTGCCCCT (2) GTGGCACGTG TGGCAGTGGA (3) TGGGGAAAAG 23.9 0.0239 P6.5 retina AAGCCAGCTC ATGCAGGGCA (3) ATGCAGGGCC CAGGCAGGAT CCTTTAACTC CTCTTGGTCT GACTGCCCCT (2) GTGGCACGTG TGGCAGTGGA (3) TGGGGAAAAA 36.8 0.0368 P10.5 crx- retina AAGCCACGCT ATGCAGGGCC CTCTTGGTCT GACTGCCCCT (2) GATGAGAGGC GTGGCTGCCA TGGCAGTGGA (3) 28 0.028 P10.5 crx+ retina ATGCAGGGCC CTCTTGGTCT CTTGGGCAGA GACTGCCCCT (2) GGGTGTGGAA (2) TGGGGAAAAA TGGGGAAAAG 36.4 0.0364 Adult retinal ATGCAGGGCA (3) CCTTTAACTC CTCTTGGTCT GACTGCCCCT (2) GAGGAGGTGG (2) GTGGCACGTG GTGGCTGCCA 37.3 0.0373 ONL CAGGCAGGAT CTCTTGGTCT CTTGGGCAGA GACTGCCCCT (2) GCAGCTGTTG (5) GGGTGTGGAA (2) TGGGGAAAAA 17.1 0.0171