Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.236553	Ctsb	cathepsin B	14	14 28.0 cM	13030
Gene Ontology	cathepsin B activity | cysteine-type endopeptidase activity | cysteine-type peptidase activity | extracellular space | hydrolase activity | lysosome | mitochondrion | peroxidase activity | protein targeting | proteolysis and peptidolysis
Human Homolog	CTSB[cathepsin B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 157 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAGCCTTC (5) AAAGCTTTTG (2) AGGGTGCTTC CACTGGGAGA (2) CTAAATATCT (2) CTTGGATGGG GCAGGCTGGA (2) GCAGGCTGGG GCAGGGCTGG (3) GCCTCCTCCT GTTCTTGTAT GTTTGCTGTG TAATCAAAAA TAGGTTGTTT 44 0.044 Cb medulloblastoma AAAAGCCTTC (5) AAAGCTTTTG (2) ACAATGTAGC (2) GCAGGCTGGG GCAGGGCTGG (3) GCTTGCTGTG (4) GTTTGCTGTG TAGCTTGTTT 59.9 0.0599 P8 GC+1d culture AAAGCTTTTG (2) AAGCTTTTGG ACAATGTAGC (2) AGGGTGCTTC CTAAATATCT (2) CTTGGATGGG GCAGGCTGGG GCCTCCTCCT GTTCTTGTAT GTTTGCTGTG TAGCTTGTTT TCCTCTCTCT 54.6 0.0546 P8 GC+SHH+1d culture AAAAGCCTTC (5) AAAGCTTTTG (2) AAGCTTTTGG AGGGTGCTTC CACTGGGAGA (2) CTAAATATCT (2) CTTGGATGGG GCAGGCTGGG GCCTCCTCCT GTTTGCTGTG TCCTCTCTCT 49.3 0.0493 3T3 fibroblasts ACAATGTAGC (2) AGGGTGCTTC GCCTCCTCCT GCTTGCTGTG (4) GTTTGCTGTG TCCTCTCTCT 31.5 0.0315 E15 cortex AAAGCTTTTG (2) AGGGTGCTTC GTTTGCTGTG TCCTCTCTCT 24.6 0.0246 P1 cortex CTTGGATGGG GTTCTTGTAT GTTTGCTGTG TCCTCTCTCT 22.6 0.0226 Hypothalamus AGGGTGCTTC CTTGGATGGG CTTGGTTGAG GCAGGCTGGG GCAGGGCTGG (3) GCCTCCTCCT GGAGGCTGGA (2) GTTTGCTGTG TAGCTTGTTT 50.7 0.0507 E12.5 retina AAAGCTTTTG (2) AGGGTGCTTC CACTGGGAGA (2) GCAGGCTGGG GTTTGCTGTG 20.7 0.0207 E14.5 retina GCAGGCTGGA (2) GCAGGCTGGG GCCTCCTCCT GTTTGCTGTG TAGCTTGTTT TAGGTTGTTT 71 0.071 E16.5 retina GAGACATCCT GCACTGGAGG GCAGGCTGGG GCCTCCTCCT GTTTGCTGTG TAGCTTGTTT TCCTCTCTCT 48.8 0.0488 E18.5 retina AAAGCTTTTG (2) GCCTCCTCCT 23.6 0.0236 P0.5 retina AAAGCTTTTG (2) AGGGTGCTTC GAGACATCCT GCAGGCTGGG GCCTCCTCCT GGAGGCTGGA (2) GTTTGCTGTG TCCTCTCTCT 25.7 0.0257 P2.5 retina AGGGTGCTTC CTAAATATCT (2) GAGACATCCT GCAGGCTGGG GCCTCCTCCT GTTTGCTGTG TAATCAAAAA TCCTCTCTCT 24.8 0.0248 P4.5 retina AAAGCTTTTG (2) AGGGTGCTTC CTAAATATCT (2) GCAGGCTGGG GCCTCCTCCT GTTTGCTGTG TAATCAAAAA TCCTCTCTCT 25.9 0.0259 P6.5 retina ACAATGTAGC (2) AGGGTGCTTC GCAGGCTGGG GCCTCCTCCT GCTTGCTGTG (4) GTTTGCTGTG TCCTCTCTCT 25 0.025 P10.5 crx- retina AGGGTGCTTC GCACTGGAGG GCAGGCTGGG GCCTCCTCCT GTTTGCTGTG TAGCTTGTTT TAGGTTGTTT 35.5 0.0355 P10.5 crx+ retina AAAGCTTTTG (2) ACAATGTAGC (2) AGGGTGCTTC CTTGGATGGG GCACTGGAGG GCAGGCTGGG GCCTCCTCCT GTTTGCTGTG 48 0.048 Adult retinal AAAGCTTTTG (2) ACAATGTAGC (2) AGGGTGCTTC CTAAATATCT (2) CTTGGTTGAG GAGACATCCT GCAGGCTGGG GCCTCCTCCT GTTTGCTGTG TCCTCTCTCT 54 0.054 ONL ACAATGTAGC (2) AGGGTGCTTC CTTGGTTGAG GAACTGGAAG GCACTGGAGG GCAGGCTGGA (2) GCAGGCTGGG GCAGGGCTGG (3) GGAGGCTGGA (2) GTTTGCTGTG TAGCTTGTTT TAGGTTGTTT TCCTCTCTCT 55.2 0.0552