Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.238973	D17Wsu164e	DNA segment, Chr 17, Wayne State University 164, expressed	17	17 42.5 cM	28123
Mm.238973	Atp5b	ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	10		11947
Gene Ontology	ATP binding | ATP biosynthesis | ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-translocating F-type ATPase complex | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | integral to membrane | ion transport | mitochondrion | mitochondrion | nucleotide binding | proton transport | proton-transporting two-sector ATPase complex | transport
Human Homolog	ATP5B[ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 126 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGGCCACAC (4) 138.7 0.1387 P8 Cb GC CAGGCTAAAC (4) 3.3 0.0033 P8 Cb GC GAAGGAAACC (3) 3.3 0.0033 P8 Cb GC GGGGCTGTGG (2) 3.3 0.0033 P8 Cb GC CAGGCACACA (2) 1.6 0.0016 P8 Cb GC CCCTGACCAG (2) 1.6 0.0016 P8 Cb GC CTGAGGCTCC (4) 1.6 0.0016 P8 Cb GC GCAGGGCCAC (2) 1.6 0.0016 P8 Cb GC TACAAGGCTT (2) 1.6 0.0016 Cb medulloblastoma CAGGCCACAC (4) 270.6 0.2706 Cb medulloblastoma GAAGGAAACC (3) 9.2 0.0092 Cb medulloblastoma GGCACAATGC (2) 4.6 0.0046 Cb medulloblastoma AATGTCATTG (2) 2.3 0.0023 Cb medulloblastoma CAGGCTAAAC (4) 2.3 0.0023 Cb medulloblastoma GTGGGACCCA (3) 2.3 0.0023 P8 GC+1d culture CAGGCCACAC (4) 97 0.097 P8 GC+1d culture GTGGGACCCA (3) 5.7 0.0057 P8 GC+1d culture CAGGCACACA (2) 2.3 0.0023 P8 GC+1d culture GGCACAATGC (2) 2.3 0.0023 P8 GC+1d culture TGACCCGTGA (2) 2.3 0.0023 P8 GC+1d culture CGGGCCACAC (2) 1.1 0.0011 P8 GC+1d culture CTGAGGCTCC (4) 1.1 0.0011 P8 GC+1d culture GCAGGGCCAC (2) 1.1 0.0011 P8 GC+SHH+1d culture CAGGCCACAC (4) 125.3 0.1253 P8 GC+SHH+1d culture CAGGCACACA (2) 2.3 0.0023 P8 GC+SHH+1d culture AACAACACAG (2) 1.2 0.0012 P8 GC+SHH+1d culture CACGCCACAC (2) 1.2 0.0012 P8 GC+SHH+1d culture GAAGGAAACC (3) 1.2 0.0012 P8 GC+SHH+1d culture GCAGGGCCAC (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGGGACCCA (3) 1.2 0.0012 P8 GC+SHH+1d culture TACAAGGCTT (2) 1.2 0.0012 P8 GC+SHH+1d culture TGACCCGTGA (2) 1.2 0.0012 3T3 fibroblasts CAGGCCACAC (4) 140.2 0.1402 3T3 fibroblasts TGACCCGTGA (2) 7 0.007 3T3 fibroblasts GCAGGGCCAC (2) 3.5 0.0035 3T3 fibroblasts GTGGGACCCA (3) 3.5 0.0035 E15 cortex CAGGCCACAC (4) 84.1 0.0841 E15 cortex GTGGGACCCA (3) 24.7 0.0247 E15 cortex GGGAAGCTGG (2) 19.8 0.0198 E15 cortex GCAGGGCCAC (2) 4.9 0.0049 P1 cortex CAGGCCACAC (4) 27.3 0.0273 P1 cortex CAGGCTAAAC (4) 4.5 0.0045 P1 cortex GTGGGACCCA (3) 4.5 0.0045 Hypothalamus CAGGCCACAC (4) 148.5 0.1485 Hypothalamus GGGAAGCTGG (2) 5.4 0.0054 Hypothalamus GTGGGACCCA (3) 5.4 0.0054 Hypothalamus GCAGGGCCAC (2) 3.6 0.0036 Hypothalamus GAAGGAAACC (3) 1.8 0.0018 Hypothalamus TAGAAGGCTT (2) 1.8 0.0018 Hypothalamus TGACCCGTGA (2) 1.8 0.0018 E12.5 retina CAGGCCACAC (4) 103.3 0.1033 E12.5 retina GTGGGACCCA (3) 3.8 0.0038 E12.5 retina GCAGGGCCAC (2) 1.9 0.0019 E14.5 retina CAGGCCACAC (4) 138.5 0.1385 E14.5 retina GAAGGAAACC (3) 3.6 0.0036 E14.5 retina TGACCCGTGA (2) 3.6 0.0036 E14.5 retina CAGGCACACA (2) 1.8 0.0018 E14.5 retina CAGGCCCCCC (2) 1.8 0.0018 E14.5 retina CAGGCTAAAC (4) 1.8 0.0018 E14.5 retina CGGGCCACAC (2) 1.8 0.0018 E14.5 retina CTGAGGCTCC (4) 1.8 0.0018 E14.5 retina GCAGGGCCAC (2) 1.8 0.0018 E16.5 retina CAGGCCACAC (4) 126.8 0.1268 E16.5 retina TGACCCGTGA (2) 7.2 0.0072 E16.5 retina GTGGGACCCA (3) 5.4 0.0054 E16.5 retina GAAGGAAACC (3) 3.6 0.0036 E16.5 retina GGGAAGCTGG (2) 3.6 0.0036 E16.5 retina AAATGATTGA (2) 1.8 0.0018 E16.5 retina GCAGGGCCAC (2) 1.8 0.0018 E16.5 retina GGCACAATGC (2) 1.8 0.0018 E18.5 retina CAGGCCACAC (4) 112.8 0.1128 E18.5 retina CAGGCACACA (2) 3.6 0.0036 E18.5 retina GTGGGACCCA (3) 3.6 0.0036 E18.5 retina TGGGTACTCT (2) 3.6 0.0036 E18.5 retina CACGCCACAC (2) 1.8 0.0018 E18.5 retina CAGGCTAAAC (4) 1.8 0.0018 P0.5 retina CAGGCCACAC (4) 90.3 0.0903 P0.5 retina AACAACACAG (2) 3.9 0.0039 P0.5 retina TGACCCGTGA (2) 2 0.002 P2.5 retina CAGGCCACAC (4) 88 0.088 P2.5 retina GCAGGGCCAC (2) 5.3 0.0053 P2.5 retina GTGGGACCCA (3) 5.3 0.0053 P2.5 retina TGACCCGTGA (2) 3.5 0.0035 P2.5 retina CTGAGGCTCC (4) 1.8 0.0018 P2.5 retina GAAGGAAACC (3) 1.8 0.0018 P2.5 retina GGGAAGCTGG (2) 1.8 0.0018 P2.5 retina TGGGTACTCT (2) 1.8 0.0018 P4.5 retina CAGGCCACAC (4) 93.1 0.0931 P4.5 retina GCAGGGCCAC (2) 4 0.004 P4.5 retina AATGTCATTG (2) 2 0.002 P4.5 retina CGGGCCACAC (2) 2 0.002 P4.5 retina GAAGGAAACC (3) 2 0.002 P6.5 retina CAGGCCACAC (4) 161.7 0.1617 P6.5 retina CACGCCACAC (2) 3.3 0.0033 P6.5 retina CCCTGACCAG (2) 3.3 0.0033 P6.5 retina GCAGGGCCAC (2) 3.3 0.0033 P6.5 retina AAATGATTGA (2) 1.7 0.0017 P6.5 retina CAGGCCCCCC (2) 1.7 0.0017 P6.5 retina GAAGGAAACC (3) 1.7 0.0017 P6.5 retina GTGGGACCCA (3) 1.7 0.0017 P6.5 retina TGACCCGTGA (2) 1.7 0.0017 P6.5 retina TGGGTACTCT (2) 1.7 0.0017 P10.5 crx- retina CAGGCCACAC (4) 189.5 0.1895 P10.5 crx- retina TGACCCGTGA (2) 9.3 0.0093 P10.5 crx- retina GAAGGAAACC (3) 5.6 0.0056 P10.5 crx- retina GTGGGACCCA (3) 5.6 0.0056 P10.5 crx- retina AAATGATTGA (2) 3.7 0.0037 P10.5 crx- retina CACGCCACAC (2) 1.9 0.0019 P10.5 crx- retina TGGGTACTCT (2) 1.9 0.0019 P10.5 crx+ retina CAGGCCACAC (4) 207.6 0.2076 P10.5 crx+ retina TGACCCGTGA (2) 5.8 0.0058 P10.5 crx+ retina GCAGGGCCAC (2) 3.8 0.0038 P10.5 crx+ retina AATGTCATTG (2) 1.9 0.0019 P10.5 crx+ retina GAAGGAAACC (3) 1.9 0.0019 P10.5 crx+ retina TAGAAGGCTT (2) 1.9 0.0019 Adult retinal CAGGCCACAC (4) 137 0.137 Adult retinal GTGGGACCCA (3) 3.7 0.0037 Adult retinal TGACCCGTGA (2) 3.7 0.0037 Adult retinal GAAGGAAACC (3) 1.9 0.0019 Adult retinal TACAAGGCTT (2) 1.9 0.0019 ONL CAGGCCACAC (4) 88.1 0.0881 ONL GCAGGGCCAC (2) 3.8 0.0038 ONL CAGGCACACA (2) 1.9 0.0019 ONL CCCTGACCAG (2) 1.9 0.0019 ONL GAAGGAAACC (3) 1.9 0.0019 ONL TGACCCGTGA (2) 1.9 0.0019