Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.238973	D17Wsu164e	DNA segment, Chr 17, Wayne State University 164, expressed	17	17 42.5 cM	28123
Mm.238973	Atp5b	ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit	10		11947
Gene Ontology	ATP binding | ATP biosynthesis | ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-translocating F-type ATPase complex | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | integral to membrane | ion transport | mitochondrion | mitochondrion | nucleotide binding | proton transport | proton-transporting two-sector ATPase complex | transport
Human Homolog	ATP5B[ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 268 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGGCCACAC (8) 138.7 0.1387 P8 Cb GC GAAATGATGA (4) 27.7 0.0277 P8 Cb GC CGCCACCAAA (7) 8.2 0.0082 P8 Cb GC GTGGTTACCT (3) 8.2 0.0082 P8 Cb GC GGCTCCGGGG (6) 4.9 0.0049 P8 Cb GC CAGGCTAAAC (5) 3.3 0.0033 P8 Cb GC GAAGGAAACC (4) 3.3 0.0033 P8 Cb GC GGGGCTGTGG (4) 3.3 0.0033 P8 Cb GC ACAGAAGCCG (7) 1.6 0.0016 P8 Cb GC CAGCCACACA (11) 1.6 0.0016 P8 Cb GC CAGGCACACA (4) 1.6 0.0016 P8 Cb GC CCCTGACCAG (4) 1.6 0.0016 P8 Cb GC CTGAGGCTCC (4) 1.6 0.0016 P8 Cb GC GCAGGGCCAC (3) 1.6 0.0016 P8 Cb GC GGCCGTGGAG (3) 1.6 0.0016 P8 Cb GC GGGAAGCCTG (5) 1.6 0.0016 P8 Cb GC TACAAGGCTT (3) 1.6 0.0016 Cb medulloblastoma CAGGCCACAC (8) 270.6 0.2706 Cb medulloblastoma CGCCACCAAA (7) 11.6 0.0116 Cb medulloblastoma GAAATGATGA (4) 11.6 0.0116 Cb medulloblastoma GAAGGAAACC (4) 9.2 0.0092 Cb medulloblastoma CAGGCAAACA (10) 6.9 0.0069 Cb medulloblastoma CAGCCACACA (11) 4.6 0.0046 Cb medulloblastoma GGCACAATGC (3) 4.6 0.0046 Cb medulloblastoma AATGTCATTG (2) 2.3 0.0023 Cb medulloblastoma ACAGAAGCCG (7) 2.3 0.0023 Cb medulloblastoma AGTTCAAATC (6) 2.3 0.0023 Cb medulloblastoma CAGGCTAAAC (5) 2.3 0.0023 Cb medulloblastoma GTGGGACCCA (4) 2.3 0.0023 P8 GC+1d culture CAGGCCACAC (8) 97 0.097 P8 GC+1d culture GAAATGATGA (4) 18.3 0.0183 P8 GC+1d culture GTGGGACCCA (4) 5.7 0.0057 P8 GC+1d culture AGTTCAAATC (6) 4.6 0.0046 P8 GC+1d culture ACAGAAGCCG (7) 3.4 0.0034 P8 GC+1d culture GGCTCCGGGG (6) 3.4 0.0034 P8 GC+1d culture CAGCCACACA (11) 2.3 0.0023 P8 GC+1d culture CAGGCACACA (4) 2.3 0.0023 P8 GC+1d culture CGCCACCAAA (7) 2.3 0.0023 P8 GC+1d culture GGCACAATGC (3) 2.3 0.0023 P8 GC+1d culture TGACCCGTGA (3) 2.3 0.0023 P8 GC+1d culture CGGGCCACAC (3) 1.1 0.0011 P8 GC+1d culture CTGAGGCTCC (4) 1.1 0.0011 P8 GC+1d culture GCAGGGCCAC (3) 1.1 0.0011 P8 GC+1d culture GGGCAGCTGG (12) 1.1 0.0011 P8 GC+SHH+1d culture CAGGCCACAC (8) 125.3 0.1253 P8 GC+SHH+1d culture CGCCACCAAA (7) 10.5 0.0105 P8 GC+SHH+1d culture GAAATGATGA (4) 5.9 0.0059 P8 GC+SHH+1d culture AGTTCAAATC (6) 4.7 0.0047 P8 GC+SHH+1d culture GGGCAGCTGG (12) 3.5 0.0035 P8 GC+SHH+1d culture ACAGAAGCCG (7) 2.3 0.0023 P8 GC+SHH+1d culture CAGGCACACA (4) 2.3 0.0023 P8 GC+SHH+1d culture CAGGCCAGAC (3) 2.3 0.0023 P8 GC+SHH+1d culture GGCTCCGGGG (6) 2.3 0.0023 P8 GC+SHH+1d culture AACAACACAG (6) 1.2 0.0012 P8 GC+SHH+1d culture CAAGCCACAC (5) 1.2 0.0012 P8 GC+SHH+1d culture CACGCCACAC (3) 1.2 0.0012 P8 GC+SHH+1d culture GAAGGAAACC (4) 1.2 0.0012 P8 GC+SHH+1d culture GCAGGGCCAC (3) 1.2 0.0012 P8 GC+SHH+1d culture GCTGAGAAAA (15) 1.2 0.0012 P8 GC+SHH+1d culture GGCCGTGGAG (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGGGACCCA (4) 1.2 0.0012 P8 GC+SHH+1d culture TACAAGGCTT (3) 1.2 0.0012 P8 GC+SHH+1d culture TGACCCGTGA (3) 1.2 0.0012 3T3 fibroblasts CAGGCCACAC (8) 140.2 0.1402 3T3 fibroblasts GGGCAGCTGG (12) 21 0.021 3T3 fibroblasts GAAATGATGA (4) 7 0.007 3T3 fibroblasts TGACCCGTGA (3) 7 0.007 3T3 fibroblasts CAGGCAAACA (10) 3.5 0.0035 3T3 fibroblasts CGCCACCAAA (7) 3.5 0.0035 3T3 fibroblasts GCAGGGCCAC (3) 3.5 0.0035 3T3 fibroblasts GTGGGACCCA (4) 3.5 0.0035 E15 cortex CAGGCCACAC (8) 84.1 0.0841 E15 cortex GTGGGACCCA (4) 24.7 0.0247 E15 cortex GGGAAGCTGG (5) 19.8 0.0198 E15 cortex GAAATGATGA (4) 4.9 0.0049 E15 cortex GCAGGGCCAC (3) 4.9 0.0049 P1 cortex CAGGCCACAC (8) 27.3 0.0273 P1 cortex GAAATGATGA (4) 18.2 0.0182 P1 cortex CAGGCTAAAC (5) 4.5 0.0045 P1 cortex GTGGGACCCA (4) 4.5 0.0045 Hypothalamus CAGGCCACAC (8) 148.5 0.1485 Hypothalamus GAAATGATGA (4) 18.1 0.0181 Hypothalamus CGCCACCAAA (7) 7.2 0.0072 Hypothalamus GGGAAGCTGG (5) 5.4 0.0054 Hypothalamus GTGGGACCCA (4) 5.4 0.0054 Hypothalamus GCAGGGCCAC (3) 3.6 0.0036 Hypothalamus GGGGGGGGGA (14) 3.6 0.0036 Hypothalamus CAGCCACACA (11) 1.8 0.0018 Hypothalamus CAGGCCAGAC (3) 1.8 0.0018 Hypothalamus GAAGGAAACC (4) 1.8 0.0018 Hypothalamus GCTGAGAAAA (15) 1.8 0.0018 Hypothalamus GGCCGTGGAG (3) 1.8 0.0018 Hypothalamus GGGCAGCTGG (12) 1.8 0.0018 Hypothalamus GGGCTCAGCC (3) 1.8 0.0018 Hypothalamus GTGGTTACCT (3) 1.8 0.0018 Hypothalamus TAGAAGGCTT (2) 1.8 0.0018 Hypothalamus TGACCCGTGA (3) 1.8 0.0018 E12.5 retina CAGGCCACAC (8) 103.3 0.1033 E12.5 retina GAAATGATGA (4) 22.5 0.0225 E12.5 retina CAGGCAAACA (10) 3.8 0.0038 E12.5 retina CAGGCCAGAC (3) 3.8 0.0038 E12.5 retina GGCTCCGGGG (6) 3.8 0.0038 E12.5 retina GGGGGGGGGA (14) 3.8 0.0038 E12.5 retina GTGGGACCCA (4) 3.8 0.0038 E12.5 retina AGTTCAAATC (6) 1.9 0.0019 E12.5 retina CGCCACCAAA (7) 1.9 0.0019 E12.5 retina GCAGGGCCAC (3) 1.9 0.0019 E12.5 retina GGGCAGCTGG (12) 1.9 0.0019 E14.5 retina CAGGCCACAC (8) 138.5 0.1385 E14.5 retina GGCTCCGGGG (6) 9.1 0.0091 E14.5 retina GGCCGTGGAG (3) 7.3 0.0073 E14.5 retina AAAATATTTT (8) 3.6 0.0036 E14.5 retina CGCCACCAAA (7) 3.6 0.0036 E14.5 retina GAAGGAAACC (4) 3.6 0.0036 E14.5 retina TGACCCGTGA (3) 3.6 0.0036 E14.5 retina CAGCCACACA (11) 1.8 0.0018 E14.5 retina CAGGCAAACA (10) 1.8 0.0018 E14.5 retina CAGGCACACA (4) 1.8 0.0018 E14.5 retina CAGGCCCCCC (2) 1.8 0.0018 E14.5 retina CAGGCTAAAC (5) 1.8 0.0018 E14.5 retina CGGGCCACAC (3) 1.8 0.0018 E14.5 retina CTGAGGCTCC (4) 1.8 0.0018 E14.5 retina GCAGGGCCAC (3) 1.8 0.0018 E14.5 retina GTGGTTACCT (3) 1.8 0.0018 E16.5 retina CAGGCCACAC (8) 126.8 0.1268 E16.5 retina CGCCACCAAA (7) 12.7 0.0127 E16.5 retina GGCTCCGGGG (6) 12.7 0.0127 E16.5 retina GAAATGATGA (4) 9.1 0.0091 E16.5 retina TGACCCGTGA (3) 7.2 0.0072 E16.5 retina GTGGGACCCA (4) 5.4 0.0054 E16.5 retina GAAGGAAACC (4) 3.6 0.0036 E16.5 retina GGATGAATCA (3) 3.6 0.0036 E16.5 retina GGGAAGCTGG (5) 3.6 0.0036 E16.5 retina AAATGATTGA (2) 1.8 0.0018 E16.5 retina CAGCCACACA (11) 1.8 0.0018 E16.5 retina GCAGGGCCAC (3) 1.8 0.0018 E16.5 retina GGCACAATGC (3) 1.8 0.0018 E16.5 retina GGGAAGCCTG (5) 1.8 0.0018 E16.5 retina GGGCAGCTGG (12) 1.8 0.0018 E16.5 retina TTCAAAGTTT (3) 1.8 0.0018 E18.5 retina CAGGCCACAC (8) 112.8 0.1128 E18.5 retina CGCCACCAAA (7) 7.3 0.0073 E18.5 retina GAAATGATGA (4) 7.3 0.0073 E18.5 retina CAGGCACACA (4) 3.6 0.0036 E18.5 retina GTGGGACCCA (4) 3.6 0.0036 E18.5 retina TGGGTACTCT (2) 3.6 0.0036 E18.5 retina AAAATATTTT (8) 1.8 0.0018 E18.5 retina CACGCCACAC (3) 1.8 0.0018 E18.5 retina CAGGCTAAAC (5) 1.8 0.0018 E18.5 retina GGCTCCGGGG (6) 1.8 0.0018 E18.5 retina GGGGGGGGGA (14) 1.8 0.0018 P0.5 retina CAGGCCACAC (8) 90.3 0.0903 P0.5 retina GAAATGATGA (4) 23.6 0.0236 P0.5 retina CGCCACCAAA (7) 7.9 0.0079 P0.5 retina AACAACACAG (6) 3.9 0.0039 P0.5 retina CAGGCAAACA (10) 3.9 0.0039 P0.5 retina GGCTCCGGGG (6) 3.9 0.0039 P0.5 retina ACAGAAGCCG (7) 2 0.002 P0.5 retina CAGCCACACA (11) 2 0.002 P0.5 retina GGATGAATCA (3) 2 0.002 P0.5 retina GGGCAGCTGG (12) 2 0.002 P0.5 retina GTGGTTACCT (3) 2 0.002 P0.5 retina TGACCCGTGA (3) 2 0.002 P2.5 retina CAGGCCACAC (8) 88 0.088 P2.5 retina CGCCACCAAA (7) 8.8 0.0088 P2.5 retina GAAATGATGA (4) 8.8 0.0088 P2.5 retina GCAGGGCCAC (3) 5.3 0.0053 P2.5 retina GTGGGACCCA (4) 5.3 0.0053 P2.5 retina CAGGCAAACA (10) 3.5 0.0035 P2.5 retina GGCTCCGGGG (6) 3.5 0.0035 P2.5 retina TGACCCGTGA (3) 3.5 0.0035 P2.5 retina CAGGCCAGAC (3) 1.8 0.0018 P2.5 retina CCCTGGCTGA (10) 1.8 0.0018 P2.5 retina CTGAGGCTCC (4) 1.8 0.0018 P2.5 retina GAAGGAAACC (4) 1.8 0.0018 P2.5 retina GGCCGTGGAG (3) 1.8 0.0018 P2.5 retina GGGAAGCTGG (5) 1.8 0.0018 P2.5 retina GGGCAGCTGG (12) 1.8 0.0018 P2.5 retina TGGGTACTCT (2) 1.8 0.0018 P4.5 retina CAGGCCACAC (8) 93.1 0.0931 P4.5 retina CGCCACCAAA (7) 17.8 0.0178 P4.5 retina GAAATGATGA (4) 13.9 0.0139 P4.5 retina CAGGCAAACA (10) 4 0.004 P4.5 retina GCAGGGCCAC (3) 4 0.004 P4.5 retina AAAATATTTT (8) 2 0.002 P4.5 retina AATGTCATTG (2) 2 0.002 P4.5 retina CAAGCCACAC (5) 2 0.002 P4.5 retina CAGGCCAGAC (3) 2 0.002 P4.5 retina CGGGCCACAC (3) 2 0.002 P4.5 retina GAAGGAAACC (4) 2 0.002 P4.5 retina GGGCAGCTGG (12) 2 0.002 P4.5 retina GGGCTCAGCC (3) 2 0.002 P4.5 retina GGGGGGGGGA (14) 2 0.002 P6.5 retina CAGGCCACAC (8) 161.7 0.1617 P6.5 retina GAAATGATGA (4) 13.3 0.0133 P6.5 retina CGCCACCAAA (7) 8.3 0.0083 P6.5 retina CAGGCAAACA (10) 6.7 0.0067 P6.5 retina GTGGGAACCA (3) 5 0.005 P6.5 retina CACGCCACAC (3) 3.3 0.0033 P6.5 retina CAGGCCAGAC (3) 3.3 0.0033 P6.5 retina CCCTGACCAG (4) 3.3 0.0033 P6.5 retina GCAGGGCCAC (3) 3.3 0.0033 P6.5 retina AAATGATTGA (2) 1.7 0.0017 P6.5 retina CAGGCCCCCC (2) 1.7 0.0017 P6.5 retina GAAGGAAACC (4) 1.7 0.0017 P6.5 retina GGGCAGCTGG (12) 1.7 0.0017 P6.5 retina GTGGGACCCA (4) 1.7 0.0017 P6.5 retina TGACCCGTGA (3) 1.7 0.0017 P6.5 retina TGGGTACTCT (2) 1.7 0.0017 P10.5 crx- retina CAGGCCACAC (8) 189.5 0.1895 P10.5 crx- retina GAAATGATGA (4) 48.3 0.0483 P10.5 crx- retina TGACCCGTGA (3) 9.3 0.0093 P10.5 crx- retina GAAGGAAACC (4) 5.6 0.0056 P10.5 crx- retina GGGCAGCTGG (12) 5.6 0.0056 P10.5 crx- retina GTGGGACCCA (4) 5.6 0.0056 P10.5 crx- retina AAATGATTGA (2) 3.7 0.0037 P10.5 crx- retina CAGGCCAGAC (3) 3.7 0.0037 P10.5 crx- retina CGCCACCAAA (7) 3.7 0.0037 P10.5 crx- retina AGTTCAAATC (6) 1.9 0.0019 P10.5 crx- retina CACGCCACAC (3) 1.9 0.0019 P10.5 crx- retina GGCTCCGGGG (6) 1.9 0.0019 P10.5 crx- retina GGGAAGCCTG (5) 1.9 0.0019 P10.5 crx- retina GGGGGGGGGA (14) 1.9 0.0019 P10.5 crx- retina TGGGTACTCT (2) 1.9 0.0019 P10.5 crx+ retina CAGGCCACAC (8) 207.6 0.2076 P10.5 crx+ retina GAAATGATGA (4) 13.5 0.0135 P10.5 crx+ retina CAAGCCACAC (5) 5.8 0.0058 P10.5 crx+ retina CGCCACCAAA (7) 5.8 0.0058 P10.5 crx+ retina TGACCCGTGA (3) 5.8 0.0058 P10.5 crx+ retina CAGGCAAACA (10) 3.8 0.0038 P10.5 crx+ retina GCAGGGCCAC (3) 3.8 0.0038 P10.5 crx+ retina GCTGAGAAAA (15) 3.8 0.0038 P10.5 crx+ retina AATGTCATTG (2) 1.9 0.0019 P10.5 crx+ retina ACAGAAGCCG (7) 1.9 0.0019 P10.5 crx+ retina AGTTCAAATC (6) 1.9 0.0019 P10.5 crx+ retina CAGCCACACA (11) 1.9 0.0019 P10.5 crx+ retina GAAGGAAACC (4) 1.9 0.0019 P10.5 crx+ retina GGATGAATCA (3) 1.9 0.0019 P10.5 crx+ retina TAGAAGGCTT (2) 1.9 0.0019 Adult retinal CAGGCCACAC (8) 137 0.137 Adult retinal GAAATGATGA (4) 20.4 0.0204 Adult retinal CGCCACCAAA (7) 9.3 0.0093 Adult retinal GGGCAGCTGG (12) 7.4 0.0074 Adult retinal CCCTGGCTGA (10) 3.7 0.0037 Adult retinal GGCCGTGGAG (3) 3.7 0.0037 Adult retinal GTGGGACCCA (4) 3.7 0.0037 Adult retinal TGACCCGTGA (3) 3.7 0.0037 Adult retinal CAAGCCACAC (5) 1.9 0.0019 Adult retinal CAGGCAAACA (10) 1.9 0.0019 Adult retinal CAGGCCAGAC (3) 1.9 0.0019 Adult retinal GAAGGAAACC (4) 1.9 0.0019 Adult retinal GCTGAGAAAA (15) 1.9 0.0019 Adult retinal GGGCTCAGCC (3) 1.9 0.0019 Adult retinal GTGGTTACCT (3) 1.9 0.0019 Adult retinal TACAAGGCTT (3) 1.9 0.0019 ONL CAGGCCACAC (8) 88.1 0.0881 ONL GAAATGATGA (4) 28.7 0.0287 ONL AAAATATTTT (8) 3.8 0.0038 ONL CAGCCACACA (11) 3.8 0.0038 ONL CAGGCAAACA (10) 3.8 0.0038 ONL GCAGGGCCAC (3) 3.8 0.0038 ONL TTCAAAGTTT (3) 3.8 0.0038 ONL CAAGCCACAC (5) 1.9 0.0019 ONL CAGGCACACA (4) 1.9 0.0019 ONL CCCTGACCAG (4) 1.9 0.0019 ONL GAAGGAAACC (4) 1.9 0.0019 ONL GGGCAGCTGG (12) 1.9 0.0019 ONL TGACCCGTGA (3) 1.9 0.0019