Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.23987
Tirap
toll-interleukin 1 receptor (TIR) domain-containing adaptor protein
9
117149
Mm.23987
C130027E04Rik
RIKEN cDNA C130027E04 gene
9
102378
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 30 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGACTCCCA
(
3
)
3.3
0.0033
Cb medulloblastoma
GTGACTCCCA
(
3
)
2.3
0.0023
P8 GC+1d culture
GTGACTCCCA
(
3
)
9.1
0.0091
P8 GC+1d culture
AAATACTGCA
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GTGACTCCCA
(
3
)
9.4
0.0094
P8 GC+SHH+1d culture
TACTATGTGG
(
3
)
1.2
0.0012
3T3 fibroblasts
GTGACTCCCA
(
3
)
7
0.007
E15 cortex
GTGACTCCCA
(
3
)
4.9
0.0049
P1 cortex
GTGACTCCCA
(
3
)
9.1
0.0091
Hypothalamus
GTGACTCCCA
(
3
)
7.2
0.0072
Hypothalamus
AAATACTGCA
(
2
)
1.8
0.0018
E12.5 retina
GTGACTCCCA
(
3
)
3.8
0.0038
E16.5 retina
GTGACTCCCA
(
3
)
9.1
0.0091
E16.5 retina
TACTATGTGG
(
3
)
3.6
0.0036
E18.5 retina
GTGACTCCCA
(
3
)
5.5
0.0055
E18.5 retina
AAATACTGCA
(
2
)
1.8
0.0018
P0.5 retina
GTGACTCCCA
(
3
)
5.9
0.0059
P0.5 retina
TACTATGTGG
(
3
)
2
0.002
P2.5 retina
GTGACTCCCA
(
3
)
10.6
0.0106
P2.5 retina
AAATACTGCA
(
2
)
1.8
0.0018
P6.5 retina
GTGACTCCCA
(
3
)
8.3
0.0083
P6.5 retina
TACTATGTGG
(
3
)
5
0.005
P6.5 retina
AAATACTGCA
(
2
)
1.7
0.0017
P6.5 retina
AAGCTGTCAT
(
2
)
1.7
0.0017
P10.5 crx- retina
GTGACTCCCA
(
3
)
3.7
0.0037
P10.5 crx- retina
TACTATGTGG
(
3
)
1.9
0.0019
P10.5 crx+ retina
GTGACTCCCA
(
3
)
5.8
0.0058
P10.5 crx+ retina
TACTATGTGG
(
3
)
3.8
0.0038
Adult retinal
GTGACTCCCA
(
3
)
1.9
0.0019
ONL
GTGACTCCCA
(
3
)
5.7
0.0057
