Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.240336	Sptlc1	serine palmitoyltransferase, long chain base subunit 1	13		268656
Gene Ontology	acyltransferase activity | biosynthesis | endoplasmic reticulum | integral to membrane | metabolism | serine C-palmitoyltransferase activity | transaminase activity | transferase activity
Human Homolog	SPTLC1[serine palmitoyltransferase, long chain base subunit 1] | SPTLC1[serine palmitoyltransferase, long chain base subunit 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 15 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTTGGTAT 1.6 0.0016 Cb medulloblastoma GGTCGGCATC 2.3 0.0023 P8 GC+1d culture GGTCGGCATC 1.1 0.0011 P8 GC+SHH+1d culture TGAACCGTGG 2.3 0.0023 3T3 fibroblasts TGAACCGTGG 7 0.007 P1 cortex GGTCGGCATC 4.5 0.0045 Hypothalamus GGTCGGCATC 3.6 0.0036 E12.5 retina CCCTTGGTAT 1.9 0.0019 E14.5 retina CCCTTGGTAT 1.8 0.0018 E18.5 retina GGTCGGCATC 1.8 0.0018 P2.5 retina GGTCGGCATC 1.8 0.0018 P4.5 retina CCCTTGGTAT GGTCGGCATC 4 0.004 Adult retinal GGTCGGCATC 1.9 0.0019 ONL GGTCGGCATC 5.7 0.0057