Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24083	Tardbp	TAR DNA binding protein	4		230908
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | RNA binding
Human Homolog	TARDBP[TAR DNA binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 119 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTCAAATGG GACGTTGTCT GATCCTAAGT GTGGCGCACA GTGTTTGATT TAGACAGAAG TCTGTTAGCT TTAGCCAGCC (3) TTCGCAGCCC TTTATGGATG (4) 39.1 0.0391 Cb medulloblastoma ACTCAAATGG GATCCTAAGT TCTGTTAGCT TTATAAAAAA TTTATGGATG (4) 13.8 0.0138 P8 GC+1d culture ACTCAAATGG CTTTCTCATC GTGGCGCACA TAGACAGAAG TCTGTTAGCC (3) TCTGTTAGCT TGTTATAACT (2) TTAGCCAGCC (3) TTCGCAGCCC TTTATGGATG (4) 30.7 0.0307 P8 GC+SHH+1d culture CTTTCTCATC GTGGCGCACA TCTGTTAGCT TTATAAAAAA TTTATGGATG (4) 29.2 0.0292 3T3 fibroblasts GTGGCGCACA 28 0.028 E15 cortex GTGGCGCACA TCTGTTAGCT 54.4 0.0544 P1 cortex CTTTCTCATC GTGGCGCACA TCTGTTAGCT 22.6 0.0226 Hypothalamus ACTCAAATGG CTTTCTCATC GATCCTAAGT GTGGCGCACA TCTGTTAGCT TTTATGGATG (4) 16.2 0.0162 E12.5 retina ACTCAAATGG CTTTCTCATC GTGGCGCACA GTGTTTGATT TAGACAGAAG TCTGTTAGCT TGTTATAACT (2) TTCAGAGTAG 39.6 0.0396 E14.5 retina ACTCAAATGG GTGGCGCACA TAGACAGAAG TCTGTTAGCC (3) TCTGTTAGCT TTTATGGATG (4) 45.4 0.0454 E16.5 retina ACTCAAATGG CTTTCTCATC GACGTTGTCT GTGGCGCACA TCTGTTAGCT TGTTATAACT (2) TTCGCAGCCC 48.9 0.0489 E18.5 retina ACTCAAATGG GTGGCGCACA GTGTTTGATT TAAACAGAAT TAGACAGAAG TCTGTTAGCT 30.9 0.0309 P0.5 retina ACTCAAATGG GACGTTGTCT GATCCTAAGT GTGGCGCACA GTGTTTGATT TAGACAGAAG TCTGTTAGCT TTTATGGATG (4) 25.7 0.0257 P2.5 retina CTTTCTCATC GTGGCGCACA TAGACAGAAG TCTGTTAGCT TTATAAAAAA TTTATGGATG (4) 38.7 0.0387 P4.5 retina ACTCAAATGG CTTTCTCATC GTGGCGCACA TAAACAGAAT TAGACAGAAG TTATAAAAAA TTCAGAGTAG 21.9 0.0219 P6.5 retina ACTCAAATGG GTGGCGCACA GTGTTTGATT TAGACAGAAG TCTGTTAGCT TGTTATAACT (2) TTCGCAGCCC 36.8 0.0368 P10.5 crx- retina ACTCAAATGG GTGGCGCACA TCTGTTAGCT TGTTATAACT (2) TTAGCCAGCC (3) TTTATGGATG (4) 39.1 0.0391 P10.5 crx+ retina ACTCAAATGG GTGGCGCACA GTGTTTGATT TAGACAGAAG TCTGTTAGCT TTAGCCAGCC (3) TTTATGGATG (4) 34.5 0.0345 Adult retinal ACTCAAATGG CTTTCTCATC GTGGCGCACA TCTGTTAGCT TTTATGGATG (4) 31.6 0.0316 ONL GTGGCGCACA GTGTTTGATT TAAACAGAAT TAGACAGAAG 19.1 0.0191