Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24174	Aars	alanyl-tRNA synthetase	8		234734
Mm.24174	Exosc6	exosome component 6	8		72544
Gene Ontology	biological_process unknown | cellular_component unknown | ligase activity | tRNA ligase activity
Human Homolog	EXOSC6[exosome component 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCAATAAAA (5) 4.9 0.0049 P8 Cb GC AGAAACTGAA (3) 1.6 0.0016 P8 Cb GC CCTGTGCTCA (3) 1.6 0.0016 Cb medulloblastoma TGCAATAAAA (5) 32.4 0.0324 Cb medulloblastoma TGCAATACTT (3) 2.3 0.0023 P8 GC+1d culture TGCAATAAAA (5) 10.3 0.0103 P8 GC+1d culture CCTGTGCTCA (3) 1.1 0.0011 P8 GC+1d culture TGCAATACTT (3) 1.1 0.0011 P8 GC+SHH+1d culture TGCAATAAAA (5) 12.9 0.0129 P8 GC+SHH+1d culture CCTGTGCTCA (3) 1.2 0.0012 3T3 fibroblasts CCTGTGCTCA (3) 10.5 0.0105 3T3 fibroblasts TGCAATAAAA (5) 3.5 0.0035 E15 cortex TGCAATAAAA (5) 4.9 0.0049 P1 cortex TGCAATAAAA (5) 9.1 0.0091 Hypothalamus TGCAATAAAA (5) 5.4 0.0054 Hypothalamus AGAAACTGAA (3) 1.8 0.0018 E12.5 retina TGCAATAAAA (5) 7.5 0.0075 E14.5 retina TGCAATAAAA (5) 7.3 0.0073 E16.5 retina TGCAATAAAA (5) 5.4 0.0054 E16.5 retina AATGGGCTCA (3) 1.8 0.0018 E16.5 retina CCTGTGCTCA (3) 1.8 0.0018 E18.5 retina TGCAATAAAA (5) 23.6 0.0236 E18.5 retina AGAAACTGAA (3) 1.8 0.0018 E18.5 retina TGCAATACTT (3) 1.8 0.0018 P0.5 retina TGCAATAAAA (5) 17.7 0.0177 P0.5 retina CCTGTGCTCA (3) 2 0.002 P2.5 retina TGCAATAAAA (5) 14.1 0.0141 P4.5 retina TGCAATAAAA (5) 15.9 0.0159 P4.5 retina CCTGTGCTCA (3) 2 0.002 P6.5 retina TGCAATAAAA (5) 18.3 0.0183 P6.5 retina TTTGGTTGAT (3) 1.7 0.0017 P10.5 crx- retina TGCAATAAAA (5) 11.1 0.0111 P10.5 crx+ retina TGCAATAAAA (5) 19.2 0.0192 P10.5 crx+ retina AATGGGCTCA (3) 1.9 0.0019 P10.5 crx+ retina TTTGGTTGAT (3) 1.9 0.0019 Adult retinal TGCAATAAAA (5) 7.4 0.0074 Adult retinal TGCAATACTT (3) 1.9 0.0019 Adult retinal TTTGGTTGAT (3) 1.9 0.0019 ONL TGCAATAAAA (5) 7.7 0.0077 ONL AATGGGCTCA (3) 1.9 0.0019