Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2423	Col2a1	procollagen, type II, alpha 1	15	15 54.5 cM	12824
Gene Ontology	cartilage condensation | cell adhesion | collagen | collagen fibril organization | cytoplasm | extracellular matrix | extracellular matrix structural constituent | extracellular matrix structural constituent conferring tensile strength | extracellular space | extracellular space | phosphate transport | proteoglycan metabolism
Human Homolog	COL2A1[collagen, type II, alpha 1 (primary osteoarthritis, spondyloepiphyseal dysplasia, congenital)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 24 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma GGTGGGATGT (2) 2.3 0.0023 P8 GC+1d culture GACATTGGAG (2) 2.3 0.0023 P8 GC+1d culture GGTGGGATGT (2) 2.3 0.0023 P8 GC+SHH+1d culture GGTGGGATGT (2) 2.3 0.0023 E15 cortex AGGATTCCCC 4.9 0.0049 E12.5 retina GACATTGGAG (2) 1.9 0.0019 E12.5 retina GGTGGGATGT (2) 1.9 0.0019 E14.5 retina GACATTGGAG (2) 5.5 0.0055 E14.5 retina GGTGGGATGT (2) 5.5 0.0055 E16.5 retina GACATTGGAG (2) 3.6 0.0036 E16.5 retina AGGATTCCCC 1.8 0.0018 E16.5 retina GGTGGGATGT (2) 1.8 0.0018 E18.5 retina GACATTGGAG (2) 1.8 0.0018 E18.5 retina GGTGGGATGT (2) 1.8 0.0018 P0.5 retina GACATTGGAG (2) 15.7 0.0157 P2.5 retina GACATTGGAG (2) 14.1 0.0141 P4.5 retina GACATTGGAG (2) 7.9 0.0079 P4.5 retina GGTGGGATGT (2) 4 0.004 P6.5 retina GACATTGGAG (2) 3.3 0.0033 P6.5 retina AGGATTCCCC 1.7 0.0017 P10.5 crx- retina GGTGGGATGT (2) 3.7 0.0037 P10.5 crx+ retina GGTGGGATGT (2) 3.8 0.0038 P10.5 crx+ retina GACATTGGAG (2) 1.9 0.0019 Adult retinal GGTGGGATGT (2) 1.9 0.0019