Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.242646	Usp9x	ubiquitin specific protease 9, X chromosome	X	X 5.5 cM	22284
Gene Ontology	cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | peptidase activity | ubiquitin thiolesterase activity | ubiquitin-dependent protein catabolism
Human Homolog	USP9X[ubiquitin specific protease 9, X-linked (fat facets-like, Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGTGGAGAG 1.6 0.0016 P8 Cb GC TTGATGCAGG (3) 1.6 0.0016 Cb medulloblastoma TTGATGCAGG (3) 2.3 0.0023 P8 GC+1d culture TTTGACAGTG (2) 3.4 0.0034 P8 GC+1d culture TTCAGCATCG 2.3 0.0023 P8 GC+1d culture GAGTGGAGAG 1.1 0.0011 P8 GC+SHH+1d culture GAGTGGAGAG 3.5 0.0035 P8 GC+SHH+1d culture TTCAGCATCG 2.3 0.0023 P8 GC+SHH+1d culture TTTGACAGTG (2) 2.3 0.0023 3T3 fibroblasts GAGTGGAGAG 7 0.007 3T3 fibroblasts TTCAGCATCG 3.5 0.0035 3T3 fibroblasts TTGATGCAGG (3) 3.5 0.0035 P1 cortex TTTGACAGTG (2) 9.1 0.0091 P1 cortex TCACACCAAT 4.5 0.0045 Hypothalamus TTCAGCATCG 5.4 0.0054 Hypothalamus GAGTGGAGAG 1.8 0.0018 Hypothalamus TTTGACAGTG (2) 1.8 0.0018 E12.5 retina GAGTGGAGAG 1.9 0.0019 E12.5 retina TTTGACAGTG (2) 1.9 0.0019 E14.5 retina TTTGACAGTG (2) 1.8 0.0018 E16.5 retina GAGTGGAGAG 3.6 0.0036 E16.5 retina TTCAGCATCG 1.8 0.0018 E16.5 retina TTGATGCAGG (3) 1.8 0.0018 E16.5 retina TTTGACAGTG (2) 1.8 0.0018 E18.5 retina TTCAGCATCG 3.6 0.0036 P0.5 retina TTTGACAGTG (2) 5.9 0.0059 P0.5 retina GAGTGGAGAG 3.9 0.0039 P2.5 retina AGTGTTGCAT 1.8 0.0018 P4.5 retina GAGTGGAGAG 2 0.002 P4.5 retina TTCAGCATCG 2 0.002 P6.5 retina GAGTGGAGAG 1.7 0.0017 P6.5 retina TTTGACAGTG (2) 1.7 0.0017 P10.5 crx- retina AGTGTTGCAT 3.7 0.0037 P10.5 crx- retina GAGTGGAGAG 3.7 0.0037 P10.5 crx- retina TTCAGCATCG 3.7 0.0037 P10.5 crx- retina TCACACCAAT 1.9 0.0019 P10.5 crx- retina TTTGACAGTG (2) 1.9 0.0019 P10.5 crx+ retina TTTGACAGTG (2) 3.8 0.0038 P10.5 crx+ retina TTCAGCATCG 1.9 0.0019 Adult retinal AAAATAGAAA 1.9 0.0019 Adult retinal AGTGTTGCAT 1.9 0.0019 Adult retinal TTTGACAGTG (2) 1.9 0.0019 ONL AAAATAGAAA 3.8 0.0038 ONL TTTGACAGTG (2) 3.8 0.0038 ONL TCACACCAAT 1.9 0.0019