Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.244975	Brca1	breast cancer 1	11	11 60.5 cM	12189
Gene Ontology	carbohydrate metabolism | centrosome cycle | condensed chromosome | cytoplasm | damaged DNA binding | DNA binding | DNA damage response, signal transduction resulting in induction of apoptosis | DNA repair | dosage compensation, by inactivation of X chromosome | hydrolase activity, hydrolyzing O-glycosyl compounds | intracellular | negative regulation of cell cycle | nucleus | nucleus | protein binding | protein binding | protein ubiquitination | RNA binding | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	BRCA1[breast cancer 1, early onset]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 19 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAATATGT AATTTGAAGT (2) 3.2 0.0032 Cb medulloblastoma TTCATAAAGG (2) 2.3 0.0023 P8 GC+SHH+1d culture AACTCATAAT (2) GCTGCTCTAG 3.5 0.0035 E15 cortex GCTGCTCTAG 4.9 0.0049 P1 cortex GCTGCTCTAG 4.5 0.0045 E12.5 retina AACTCATAAT (2) AATTTGAAGT (2) 7.6 0.0076 E14.5 retina AACTCATAAT (2) AATTTGAAGT (2) 5.4 0.0054 E16.5 retina AAAAATATGT 1.8 0.0018 E18.5 retina GCTGCTCTAG 1.8 0.0018 P0.5 retina TTCATAAAGG (2) 2 0.002 P4.5 retina AAAAATATGT 2 0.002 P6.5 retina AATTTGAAGT (2) TTCATAAAGG (2) 5 0.005 P10.5 crx+ retina AATTTGAAGT (2) 1.9 0.0019 ONL AATTTGAAGT (2) 1.9 0.0019