Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.245890	Spred1	sprouty protein with EVH-1 domain 1, related sequence	2		114715
Gene Ontology	inactivation of MAPK | protein binding | stem cell factor receptor binding
Human Homolog	SPRED1[sprouty-related, EVH1 domain containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 100 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAACCTGTA (3) 8.2 0.0082 P8 Cb GC ACAAAAAAAA (31) 6.5 0.0065 P8 Cb GC CTTACCAAAA (3) 1.6 0.0016 P8 Cb GC GCATTTCCTA 1.6 0.0016 P8 Cb GC TAATTGGACG 1.6 0.0016 P8 Cb GC TTGGAAAAAA (8) 1.6 0.0016 Cb medulloblastoma ACAAAAAAAA (31) 34.7 0.0347 Cb medulloblastoma AAAACCTGTA (3) 4.6 0.0046 Cb medulloblastoma TACGTTGCGT 2.3 0.0023 Cb medulloblastoma TGTGCTAATA (4) 2.3 0.0023 P8 GC+1d culture ACAAAAAAAA (31) 5.7 0.0057 P8 GC+1d culture TAATTGGACG 3.4 0.0034 P8 GC+1d culture TTGGAAAAAA (8) 2.3 0.0023 P8 GC+1d culture AAAACCTGTA (3) 1.1 0.0011 P8 GC+1d culture CTTTAATATT (5) 1.1 0.0011 P8 GC+1d culture TAACTTGGAT (2) 1.1 0.0011 P8 GC+SHH+1d culture ACAAAAAAAA (31) 14.1 0.0141 P8 GC+SHH+1d culture AAAACCTGTA (3) 8.2 0.0082 P8 GC+SHH+1d culture TTGGAAAAAA (8) 3.5 0.0035 P8 GC+SHH+1d culture CTTACCAAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TAATTGGACG 1.2 0.0012 P8 GC+SHH+1d culture TGTGCTAATA (4) 1.2 0.0012 3T3 fibroblasts AAAACCTGTA (3) 3.5 0.0035 E15 cortex AAAACCTGTA (3) 4.9 0.0049 E15 cortex ACAAAAAAAA (31) 4.9 0.0049 E15 cortex GGCATTTCCT (3) 4.9 0.0049 P1 cortex ACAAAAAAAA (31) 4.5 0.0045 P1 cortex TTGGAAAAAA (8) 4.5 0.0045 Hypothalamus ACAAAAAAAA (31) 10.9 0.0109 Hypothalamus AAAACCTGTA (3) 3.6 0.0036 Hypothalamus CTTACCAAAA (3) 3.6 0.0036 Hypothalamus GGCATTTCCT (3) 3.6 0.0036 Hypothalamus TAATTGGACG 3.6 0.0036 Hypothalamus TACGTTGCGT 1.8 0.0018 Hypothalamus TGAGAGATTC (2) 1.8 0.0018 Hypothalamus TGTGCTAATA (4) 1.8 0.0018 E12.5 retina AAAACCTGTA (3) 5.6 0.0056 E12.5 retina GCATTTCCTA 3.8 0.0038 E12.5 retina TAATTGGACG 3.8 0.0038 E12.5 retina ACAAAAAAAA (31) 1.9 0.0019 E12.5 retina CTTTAATATT (5) 1.9 0.0019 E12.5 retina GAATATCCAA 1.9 0.0019 E12.5 retina TTGGAAAAAA (8) 1.9 0.0019 E14.5 retina ACAAAAAAAA (31) 5.5 0.0055 E14.5 retina GAATATCCAA 3.6 0.0036 E14.5 retina AAAACCTGTA (3) 1.8 0.0018 E14.5 retina GCATTTCCTA 1.8 0.0018 E14.5 retina TAATTGGACG 1.8 0.0018 E16.5 retina AAAACCTGTA (3) 3.6 0.0036 E16.5 retina TAATTGGACG 3.6 0.0036 E16.5 retina ACAAAAAAAA (31) 1.8 0.0018 E16.5 retina CTTTAATATT (5) 1.8 0.0018 E16.5 retina GAAATAAACT (3) 1.8 0.0018 E16.5 retina TAACTTGGAT (2) 1.8 0.0018 E16.5 retina TGTGCTAATA (4) 1.8 0.0018 E18.5 retina ACAAAAAAAA (31) 14.6 0.0146 E18.5 retina TTGGAAAAAA (8) 9.1 0.0091 E18.5 retina AATATTTTCA (5) 5.5 0.0055 E18.5 retina TAATTGGACG 3.6 0.0036 E18.5 retina CTTTAATATT (5) 1.8 0.0018 E18.5 retina GAATATCCAA 1.8 0.0018 E18.5 retina TAACTTGGAT (2) 1.8 0.0018 E18.5 retina TACGTTGCGT 1.8 0.0018 P0.5 retina ACAAAAAAAA (31) 5.9 0.0059 P0.5 retina TAATTGGACG 2 0.002 P0.5 retina TGAGAGATTC (2) 2 0.002 P0.5 retina TGTGCTAATA (4) 2 0.002 P2.5 retina ACAAAAAAAA (31) 5.3 0.0053 P2.5 retina AAAACCTGTA (3) 3.5 0.0035 P2.5 retina TGTGCTAATA (4) 3.5 0.0035 P2.5 retina TTGGAAAAAA (8) 3.5 0.0035 P2.5 retina CTTTAATATT (5) 1.8 0.0018 P2.5 retina TACGTTGCGT 1.8 0.0018 P4.5 retina ACAAAAAAAA (31) 5.9 0.0059 P4.5 retina TGAGAGATTC (2) 4 0.004 P4.5 retina AAAACCTGTA (3) 2 0.002 P4.5 retina TAACTTGGAT (2) 2 0.002 P4.5 retina TAATTGGACG 2 0.002 P6.5 retina TTGGAAAAAA (8) 5 0.005 P6.5 retina AAAACCTGTA (3) 3.3 0.0033 P6.5 retina TAATTGGACG 3.3 0.0033 P6.5 retina ACAAAAAAAA (31) 1.7 0.0017 P6.5 retina TGTGCTAATA (4) 1.7 0.0017 P10.5 crx- retina AAAACCTGTA (3) 3.7 0.0037 P10.5 crx- retina ACAAAAAAAA (31) 1.9 0.0019 P10.5 crx- retina CTTTAATATT (5) 1.9 0.0019 P10.5 crx- retina GAAATAAACT (3) 1.9 0.0019 P10.5 crx- retina TGAGAGATTC (2) 1.9 0.0019 P10.5 crx+ retina ACAAAAAAAA (31) 11.5 0.0115 P10.5 crx+ retina AAAACCTGTA (3) 7.7 0.0077 P10.5 crx+ retina TAATTGGACG 1.9 0.0019 P10.5 crx+ retina TGAGAGATTC (2) 1.9 0.0019 Adult retinal TAATTGGACG 3.7 0.0037 Adult retinal TGTGCTAATT 1.9 0.0019 Adult retinal TTGGAAAAAA (8) 1.9 0.0019 ONL ACAAAAAAAA (31) 5.7 0.0057 ONL AAAACCTGTA (3) 1.9 0.0019 ONL TAATTGGACG 1.9 0.0019 ONL TGTGCTAATT 1.9 0.0019 ONL TTGGAAAAAA (8) 1.9 0.0019