Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.247113	A230103N10Rik	RIKEN cDNA A230103N10 gene	11		104625
Gene Ontology	exonuclease activity | hydrolase activity | magnesium ion binding | nuclease activity | nucleus | regulation of transcription, DNA-dependent | RNA binding
Human Homolog	KIAA1194[carbon catabolite repression 4 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 115 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAAAAAAAA (31) 6.5 0.0065 P8 Cb GC CCTTGAAATA (2) 4.9 0.0049 P8 Cb GC TAACAAAACC 1.6 0.0016 P8 Cb GC TCATCTGGAA (2) 1.6 0.0016 P8 Cb GC TGTATTTCTT (4) 1.6 0.0016 Cb medulloblastoma ACAAAAAAAA (31) 34.7 0.0347 Cb medulloblastoma TAACAAAACC 4.6 0.0046 Cb medulloblastoma CAGAGAAAAT (2) 2.3 0.0023 P8 GC+1d culture TAACAAAACC 8 0.008 P8 GC+1d culture ACAAAAAAAA (31) 5.7 0.0057 P8 GC+1d culture TCATCTGGAA (2) 4.6 0.0046 P8 GC+1d culture ACAGAAGAAA (9) 3.4 0.0034 P8 GC+1d culture GATACTGGAA (2) 2.3 0.0023 P8 GC+1d culture TGTATTTCTT (4) 2.3 0.0023 P8 GC+1d culture AATGTTAATT (2) 1.1 0.0011 P8 GC+1d culture ATGCACACTA 1.1 0.0011 P8 GC+1d culture CCTTGAAATA (2) 1.1 0.0011 P8 GC+1d culture GGACACTTAA (4) 1.1 0.0011 P8 GC+SHH+1d culture ACAAAAAAAA (31) 14.1 0.0141 P8 GC+SHH+1d culture TAACAAAACC 9.4 0.0094 P8 GC+SHH+1d culture AATGTTAATT (2) 2.3 0.0023 P8 GC+SHH+1d culture TCATCTGGAA (2) 2.3 0.0023 P8 GC+SHH+1d culture ACAGAAGAAA (9) 1.2 0.0012 P8 GC+SHH+1d culture GATACTGGAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GGACACTTAA (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTATTTCTT (4) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts CCTTGAAATA (2) 7 0.007 3T3 fibroblasts TCATCTGGAA (2) 3.5 0.0035 E15 cortex CCTTGAAATA (2) 9.9 0.0099 E15 cortex ACAAAAAAAA (31) 4.9 0.0049 E15 cortex ACAGAAGAAA (9) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex CCTTGAAATA (2) 13.6 0.0136 P1 cortex ACAAAAAAAA (31) 4.5 0.0045 P1 cortex ACAGAAGAAA (9) 4.5 0.0045 P1 cortex TAACAAAACC 4.5 0.0045 Hypothalamus ACAAAAAAAA (31) 10.9 0.0109 Hypothalamus TCATCTGGAA (2) 3.6 0.0036 Hypothalamus TGTATTTCTT (4) 3.6 0.0036 Hypothalamus ATTCATCTGT (5) 1.8 0.0018 Hypothalamus GGCACAATAT (3) 1.8 0.0018 Hypothalamus TAACAAAACC 1.8 0.0018 E12.5 retina TGTATTTCTT (4) 5.6 0.0056 E12.5 retina TCATCTGGAA (2) 3.8 0.0038 E12.5 retina ACAAAAAAAA (31) 1.9 0.0019 E12.5 retina CAGAGAAAAT (2) 1.9 0.0019 E14.5 retina TGTATTTCTT (4) 9.1 0.0091 E14.5 retina ACAAAAAAAA (31) 5.5 0.0055 E14.5 retina ATTCATCTGT (5) 1.8 0.0018 E14.5 retina GGCACAATAT (3) 1.8 0.0018 E16.5 retina TGTATTTCTT (4) 5.4 0.0054 E16.5 retina GGACACTTAA (4) 3.6 0.0036 E16.5 retina GGCACAATAT (3) 3.6 0.0036 E16.5 retina TTGATGGCTG (2) 3.6 0.0036 E16.5 retina ACAAAAAAAA (31) 1.8 0.0018 E16.5 retina ACAGAAGAAA (9) 1.8 0.0018 E16.5 retina GGCACTTTAA 1.8 0.0018 E16.5 retina TAACAAAACC 1.8 0.0018 E18.5 retina ACAAAAAAAA (31) 14.6 0.0146 E18.5 retina TCATCTGGAA (2) 3.6 0.0036 E18.5 retina TGTATTTCTT (4) 3.6 0.0036 P0.5 retina TAACAAAACC 7.9 0.0079 P0.5 retina ACAAAAAAAA (31) 5.9 0.0059 P0.5 retina ATGCACACTA 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TCATCTGGAA (2) 2 0.002 P0.5 retina TGTATTTCTT (4) 2 0.002 P2.5 retina TAACAAAACC 7 0.007 P2.5 retina ACAAAAAAAA (31) 5.3 0.0053 P2.5 retina CCTTGAAATA (2) 3.5 0.0035 P2.5 retina TCATCTGGAA (2) 3.5 0.0035 P2.5 retina TGTATTTCTT (4) 3.5 0.0035 P2.5 retina ACAGAAGAAA (9) 1.8 0.0018 P2.5 retina GGCACAATAT (3) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina CCTTGAAATA (2) 7.9 0.0079 P4.5 retina TAACAAAACC 7.9 0.0079 P4.5 retina ACAAAAAAAA (31) 5.9 0.0059 P4.5 retina TGTATTTCTT (4) 5.9 0.0059 P4.5 retina TCATCTGGAA (2) 4 0.004 P4.5 retina CATTTGTACA (7) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TTGATGGCTG (2) 2 0.002 P6.5 retina TAACAAAACC 8.3 0.0083 P6.5 retina CATTTGTACA (7) 3.3 0.0033 P6.5 retina GGCACTTTAA 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TCATCTGGAA (2) 3.3 0.0033 P6.5 retina AATGTTAATT (2) 1.7 0.0017 P6.5 retina ACAAAAAAAA (31) 1.7 0.0017 P6.5 retina ACAGAAGAAA (9) 1.7 0.0017 P6.5 retina CCTTGAAATA (2) 1.7 0.0017 P6.5 retina TGTATTTCTT (4) 1.7 0.0017 P10.5 crx- retina TAACAAAACC 5.6 0.0056 P10.5 crx- retina TCATCTGGAA (2) 5.6 0.0056 P10.5 crx- retina ACAAAAAAAA (31) 1.9 0.0019 P10.5 crx- retina CCTTGAAATA (2) 1.9 0.0019 P10.5 crx- retina GATACTGGAA (2) 1.9 0.0019 P10.5 crx+ retina ACAAAAAAAA (31) 11.5 0.0115 P10.5 crx+ retina TCATCTGGAA (2) 9.6 0.0096 P10.5 crx+ retina CCTTGAAATA (2) 3.8 0.0038 P10.5 crx+ retina ATTCATCTGT (5) 1.9 0.0019 P10.5 crx+ retina TAACAAAACC 1.9 0.0019 Adult retinal ATGCACACTA 3.7 0.0037 Adult retinal CCTTGAAATA (2) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TAACAAAACC 1.9 0.0019 ONL TAACAAAACC 7.7 0.0077 ONL ACAAAAAAAA (31) 5.7 0.0057 ONL ATGCACACTA 5.7 0.0057 ONL GTCATAGCTG (590) 5.7 0.0057 ONL CCTTGAAATA (2) 3.8 0.0038 ONL CAGAGAAAAT (2) 1.9 0.0019 ONL TCATCTGGAA (2) 1.9 0.0019