Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.247788	Cct2	chaperonin subunit 2 (beta)	10		12461
Gene Ontology	ATP binding | protein amino acid phosphorylation | protein folding | protein kinase activity
Human Homolog	CCT2[chaperonin containing TCP1, subunit 2 (beta)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 162 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGGATTCGCA CTGTGACACA GAACATTGCA (2) GCTTCCCTTT GGAAGTGGGC GGTCTAATTT GTTCTGACTG TCCATCAAGA (2) TCTTCAAAAA (4) TTCTATCTCT 74.9 0.0749 Cb medulloblastoma CACCCAAAAA (2) CGGATTCGCA GAACATTGCA (2) GCTTCCCTTT GGAAGTGGGC GGTCTAATTT TCCATCAAGA (2) 53 0.053 P8 GC+1d culture ATGCTCTTTG (2) CGGATTCGCA GAACATTGCA (2) GCTTCCCTTT GGAAGTGGGC GGTCTAATTT GTTCTGACTG TCCATCAAGA (2) 101.6 0.1016 P8 GC+SHH+1d culture ATGCTCTTTG (2) CAGAAAAAGG CGGATTCGCA CTGTGACACA GAACATTGCA (2) GGAAGTGGGC GGGGGGGTAA GGTCTAATTT GTTCTGACTG TCCATCAAGA (2) TCTTCAAAAA (4) TTCTATCTCT 89.1 0.0891 3T3 fibroblasts GAACATTGCA (2) GGAAGTGGGC TCCATCAAGA (2) 234.8 0.2348 E15 cortex CGGATTCGCA GGAAGTGGGC GGTCTAATTT TCCATCAAGA (2) 44.4 0.0444 P1 cortex AAAATAATTT (2) CGGATTCGCA GAACATTGCA (2) GGTCTAATTT TCCATCAAGA (2) 45.3 0.0453 Hypothalamus AAAATAATTT (2) CACAGACCAT (2) CACCCAAAAA (2) CAGAAAAAGG CGGATTCGCA GAACATTGCA (2) GGAAGTGGGC GGTCTAATTT GTTCTGACTG TCCATCAAGA (2) 81.4 0.0814 E12.5 retina CGGATTCGCA GAACATTGCA (2) GCTTCCCTTT GGAAGTGGGC GGTCTAATTT TCCATCAAGA (2) 84.5 0.0845 E14.5 retina AAAATAATTT (2) GAACATTGCA (2) GGAAGTGGGC GGTCTAATTT GGTTTAATTT (2) GTTCTGACTG TCCATCAAGA (2) TTCTATCTCT 74.6 0.0746 E16.5 retina CGGATTCGCA CTGTGACACA GAACATTGCA (2) GGAAGTGGGC GGTCTAATTT TCCATCAAGA (2) TCCCTCCAAG 65.1 0.0651 E18.5 retina AAAATAATTT (2) CGGATTCGCA GAAAAATTCT (2) GCTTCCCTTT GGAAGTGGGC GGTCTAATTT TCCATCAAGA (2) TCCCTCCAAG 50.9 0.0509 P0.5 retina CACAGACCAT (2) CGGATTCGCA GAACATTGCA (2) GCTTCCCTTT GGAAGTGGGC GGTCTAATTT GGTTTAATTT (2) TCCATCAAGA (2) TCCCTCCAAG 47.2 0.0472 P2.5 retina CGGATTCGCA GAACATTGCA (2) GAATAAATTG (2) GCTTCCCTTT GGAAGTGGGC GGTCTAATTT GGTGTGGACA (4) TCCATCAAGA (2) TCCCTCCAAG 72.3 0.0723 P4.5 retina CACCCAAAAA (2) CGGATTCGCA GAACATTGCA (2) GAATAAATTG (2) GCTTCCCTTT GGAAGTGGGC GGTCTAATTT GGTTTAATTT (2) TCCATCAAGA (2) TCCCTCCAAG 83.3 0.0833 P6.5 retina CACAGACCAT (2) CGGATTCGCA GAACATTGCA (2) GCTTCCCTTT GGAAGTGGGC GGTCTAATTT GGTGTGGACA (4) GGTTTAATTT (2) GTTCTGACTG TCCATCAAGA (2) TTCTATCTCT 118.6 0.1186 P10.5 crx- retina AAAATAATTT (2) CGGATTCGCA GAACATTGCA (2) GCTTCCCTTT GGAAGTGGGC GGTCTAATTT GGTTTAATTT (2) GTTCTGACTG TCCATCAAGA (2) TCCCTCCAAG 98.6 0.0986 P10.5 crx+ retina CGGATTCGCA GAACATTGCA (2) GCTTCCCTTT GGAAGTGGGC GGTCTAATTT GGTGTGGACA (4) TCCATCAAGA (2) TCCCTCCAAG 63.4 0.0634 Adult retinal CGGATTCGCA GAACATTGCA (2) GCTTCCCTTT GGAAGTGGGC GGGGGGGTAA GGTCTAATTT GGTGTGGACA (4) TCCATCAAGA (2) 40.9 0.0409 ONL CGGATTCGCA GAAAAATTCT (2) GAACATTGCA (2) GCTTCCCTTT GGTCTAATTT GGTGTGGACA (4) GGTTTAATTT (2) TCCATCAAGA (2) TCTTCAAAAA (4) 40.1 0.0401