Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.248188	Lsm4	LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)	8		50783
Gene Ontology	DNA binding | mRNA processing | nuclear mRNA splicing, via spliceosome | nucleus | pre-mRNA splicing factor activity | regulation of transcription, DNA-dependent | ribonucleoprotein complex | RNA binding | small nucleolar ribonucleoprotein complex | spliceosome complex
Human Homolog	LSM4[LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 29 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCGGCTCACC 22.8 0.0228 Cb medulloblastoma GCGGCTCACC 20.8 0.0208 P8 GC+1d culture GCGGCTCACC 37.7 0.0377 P8 GC+SHH+1d culture GCGGCTCACC 46.8 0.0468 P8 GC+SHH+1d culture GGCGGCGCTG 1.2 0.0012 3T3 fibroblasts GCGGCTCACC 3.5 0.0035 E15 cortex GCGGCTCACC 24.7 0.0247 E15 cortex GGCGGGCTTT 4.9 0.0049 Hypothalamus GCGGCTCACC 21.7 0.0217 Hypothalamus GGCGGCGCTG 3.6 0.0036 E12.5 retina GCGGCTCACC 54.4 0.0544 E14.5 retina GCGGCTCACC 58.3 0.0583 E14.5 retina GTGCGGGAGG (2) 1.8 0.0018 E16.5 retina GCGGCTCACC 65.2 0.0652 E16.5 retina GTGCGGGAGG (2) 1.8 0.0018 E18.5 retina GCGGCTCACC 54.6 0.0546 E18.5 retina GGCGGCGCTG 1.8 0.0018 P0.5 retina GCGGCTCACC 47.1 0.0471 P2.5 retina GCGGCTCACC 44 0.044 P2.5 retina GGCGGCGCTG 1.8 0.0018 P4.5 retina GCGGCTCACC 15.9 0.0159 P6.5 retina GCGGCTCACC 53.4 0.0534 P10.5 crx- retina GCGGCTCACC 29.7 0.0297 P10.5 crx- retina GTGCGGGAGG (2) 1.9 0.0019 P10.5 crx+ retina GCGGCTCACC 50 0.05 P10.5 crx+ retina GGCGGGCTTT 1.9 0.0019 Adult retinal GCGGCTCACC 38.9 0.0389 Adult retinal GGCGGGCTTT 1.9 0.0019 ONL GCGGCTCACC 28.7 0.0287