Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.248517 Taf6TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 5    21343 
 Gene Ontology DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor TFIID complex | transcription initiation | transcription initiation factor activity
 Human Homolog TAF6[TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCGTGTACATTC (2)4.90.0049
P8 Cb GCTGCTGACCTC (2)3.30.0033
Cb medulloblastomaGTGTACATTC (2)4.60.0046
P8 GC+1d cultureGTGTACATTC (2)4.60.0046
P8 GC+1d cultureTGCTGACCTC (2)3.40.0034
P8 GC+1d cultureGGTAGAGGTG2.30.0023
P8 GC+1d cultureCTCCGGTCTC (2)1.10.0011
P8 GC+1d cultureTGCTGACTCC1.10.0011
P8 GC+SHH+1d cultureGTGTACATTC (2)2.30.0023
P8 GC+SHH+1d cultureTGCTGACCTC (2)2.30.0023
3T3 fibroblastsTGCTGACCTC (2)70.007
3T3 fibroblastsGGTAGAGGTG3.50.0035
E15 cortexGTGTACATTC (2)4.90.0049
E15 cortexTGCTGACCTC (2)4.90.0049
HypothalamusTGCTGACCTC (2)1.80.0018
HypothalamusTGCTGACTCC1.80.0018
E12.5 retinaCTCCGGTCTC (2)1.90.0019
E12.5 retinaGTGTACATTC (2)1.90.0019
E12.5 retinaTGCTGACCTC (2)1.90.0019
E14.5 retinaTGCTGACCTC (2)5.50.0055
E14.5 retinaGGTAGAGGTG1.80.0018
E14.5 retinaGTGTACATTC (2)1.80.0018
E16.5 retinaTGCTGACCTC (2)9.10.0091
E16.5 retinaGTGTACATTC (2)1.80.0018
E18.5 retinaGTGTACATTC (2)5.50.0055
E18.5 retinaTGCTGACCTC (2)5.50.0055
P0.5 retinaTGCTGACCTC (2)9.80.0098
P0.5 retinaGTGTACATTC (2)20.002
P2.5 retinaGTGTACATTC (2)70.007
P2.5 retinaTGCTGACCTC (2)3.50.0035
P4.5 retinaGTGTACATTC (2)5.90.0059
P4.5 retinaTGCTGACCTC (2)40.004
P6.5 retinaTGCTGACCTC (2)6.70.0067
P10.5 crx- retinaTGCTGACCTC (2)7.40.0074
P10.5 crx- retinaGTGTACATTC (2)5.60.0056
P10.5 crx- retinaCTCCGGTCTC (2)3.70.0037
P10.5 crx+ retinaTGCTGACCTC (2)13.50.0135
P10.5 crx+ retinaGGTAGAGGTG1.90.0019
Adult retinalTGCTGACCTC (2)5.60.0056
ONLTGCTGACTCC3.80.0038
ONLGTGTACATTC (2)1.90.0019
ONLTGCTGACCTC (2)1.90.0019