Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.248778	Ndufa10	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10	1		67273
Gene Ontology	ATP binding | extracellular space | mitochondrion | nucleobase, nucleoside, nucleotide and nucleic acid metabolism | oxidoreductase activity | phosphotransferase activity, alcohol group as acceptor
Human Homolog	NDUFA10[NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGATGCCTG (2) 11.4 0.0114 P8 Cb GC GTGGCACACA (30) 6.5 0.0065 P8 Cb GC AAGTACTACC (4) 1.6 0.0016 P8 Cb GC TGTGGACCAC (5) 1.6 0.0016 Cb medulloblastoma GAGATGCCTG (2) 13.9 0.0139 Cb medulloblastoma GTGGCACACA (30) 11.6 0.0116 Cb medulloblastoma GCTATGACAC (2) 2.3 0.0023 P8 GC+1d culture GAGATGCCTG (2) 13.7 0.0137 P8 GC+1d culture GTGGCACACA (30) 13.7 0.0137 P8 GC+1d culture AAGTACTACC (4) 2.3 0.0023 P8 GC+1d culture GCTATGACAC (2) 1.1 0.0011 P8 GC+SHH+1d culture GAGATGCCTG (2) 12.9 0.0129 P8 GC+SHH+1d culture GTGGCACACA (30) 2.3 0.0023 P8 GC+SHH+1d culture GCTATGACAC (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTGGACCAC (5) 1.2 0.0012 3T3 fibroblasts GAGATGCCTG (2) 31.5 0.0315 3T3 fibroblasts GTGGCACACA (30) 14 0.014 3T3 fibroblasts TAACTTGCAT 3.5 0.0035 E15 cortex GTGGCACACA (30) 24.7 0.0247 E15 cortex GAGATGCCTG (2) 4.9 0.0049 P1 cortex ACAACAGGAA 4.5 0.0045 P1 cortex GAGATGCCTG (2) 4.5 0.0045 P1 cortex GTGGCACACA (30) 4.5 0.0045 Hypothalamus GAGATGCCTG (2) 18.1 0.0181 Hypothalamus GTGGCACACA (30) 7.2 0.0072 Hypothalamus GCTATGACAC (2) 5.4 0.0054 Hypothalamus ACAACAGGAA 1.8 0.0018 Hypothalamus GAAATGAAGG (8) 1.8 0.0018 E12.5 retina GTGGCACACA (30) 11.3 0.0113 E12.5 retina GAGATGCCTG (2) 7.5 0.0075 E12.5 retina AAGTACTACC (4) 1.9 0.0019 E12.5 retina GCTATGACAC (2) 1.9 0.0019 E14.5 retina GAGATGCCTG (2) 20 0.02 E14.5 retina GTGGCACACA (30) 18.2 0.0182 E14.5 retina AAGTACTACC (4) 3.6 0.0036 E14.5 retina ACAACAGGAA 1.8 0.0018 E16.5 retina GAGATGCCTG (2) 23.5 0.0235 E16.5 retina GTGGCACACA (30) 9.1 0.0091 E16.5 retina GAAATGAAGG (8) 1.8 0.0018 E16.5 retina GCTATGACAC (2) 1.8 0.0018 E18.5 retina GAGATGCCTG (2) 10.9 0.0109 E18.5 retina GTGGCACACA (30) 5.5 0.0055 P0.5 retina GAGATGCCTG (2) 23.6 0.0236 P0.5 retina GTGGCACACA (30) 11.8 0.0118 P0.5 retina AAGTACTACC (4) 2 0.002 P2.5 retina GTGGCACACA (30) 17.6 0.0176 P2.5 retina GAGATGCCTG (2) 15.8 0.0158 P2.5 retina GAAATGAAGG (8) 1.8 0.0018 P2.5 retina GCTATGACAC (2) 1.8 0.0018 P4.5 retina GAGATGCCTG (2) 17.8 0.0178 P4.5 retina GTGGCACACA (30) 11.9 0.0119 P4.5 retina ACAACAGGAA 2 0.002 P4.5 retina TAACTTGCAT 2 0.002 P6.5 retina GTGGCACACA (30) 26.7 0.0267 P6.5 retina GAGATGCCTG (2) 11.7 0.0117 P6.5 retina AAGTACTACC (4) 1.7 0.0017 P6.5 retina GCTATGACAC (2) 1.7 0.0017 P10.5 crx- retina GAGATGCCTG (2) 22.3 0.0223 P10.5 crx- retina GTGGCACACA (30) 13 0.013 P10.5 crx- retina AAGTACTACC (4) 7.4 0.0074 P10.5 crx- retina GAAATGAAGG (8) 1.9 0.0019 P10.5 crx+ retina GAGATGCCTG (2) 15.4 0.0154 P10.5 crx+ retina GTGGCACACA (30) 7.7 0.0077 P10.5 crx+ retina GCTATGACAC (2) 1.9 0.0019 P10.5 crx+ retina TGTGGACCAC (5) 1.9 0.0019 Adult retinal GAGATGCCTG (2) 18.5 0.0185 Adult retinal GTGGCACACA (30) 5.6 0.0056 Adult retinal GCTATGACAC (2) 1.9 0.0019 ONL GTGGCACACA (30) 24.9 0.0249 ONL GAGATGCCTG (2) 15.3 0.0153