Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.250474
Commd6
COMM domain containing 6
14
66200
Gene Ontology
biological_process unknown
|
cellular_component unknown
|
molecular_function unknown
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 63 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGGCAAAAC (
40
)
11.4
0.0114
P8 Cb GC
ATGTCTCTTC
(
3
)
1.6
0.0016
P8 Cb GC
GAAACCTCAA
1.6
0.0016
P8 Cb GC
TGGTTCTGGG
(
7
)
1.6
0.0016
Cb medulloblastoma
ATGTCTCTTC
(
3
)
4.6
0.0046
Cb medulloblastoma
CAGGCAAAAC (
40
)
4.6
0.0046
Cb medulloblastoma
CAAGCAAAAA (
5
)
2.3
0.0023
P8 GC+1d culture
CAGGCAAAAC (
40
)
5.7
0.0057
P8 GC+1d culture
CCTGCCTGCC (
9
)
1.1
0.0011
P8 GC+1d culture
GCTGTGAGCT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CAGGCAAAAC (
40
)
11.7
0.0117
P8 GC+SHH+1d culture
GAAACCTCAA
1.2
0.0012
3T3 fibroblasts
CAGGCAAAAC (
40
)
10.5
0.0105
3T3 fibroblasts
TGGTTCTGGG
(
7
)
3.5
0.0035
E15 cortex
CAGGCAAAAC (
40
)
4.9
0.0049
E15 cortex
CAGGCAAACC (
7
)
4.9
0.0049
E15 cortex
GAAGCTCACA
(
2
)
4.9
0.0049
P1 cortex
CAGGCAAAAC (
40
)
9.1
0.0091
P1 cortex
GCTGTGAGCT
(
4
)
4.5
0.0045
Hypothalamus
CAGGCAAAAC (
40
)
5.4
0.0054
Hypothalamus
TGGTTCTGGG
(
7
)
5.4
0.0054
Hypothalamus
ATGTCTCTTC
(
3
)
3.6
0.0036
Hypothalamus
CAGGCAAACC (
7
)
1.8
0.0018
E12.5 retina
CAGGCAAAAC (
40
)
20.7
0.0207
E12.5 retina
ATGTCTCTTC
(
3
)
3.8
0.0038
E12.5 retina
CCTGCCTGCC (
9
)
1.9
0.0019
E12.5 retina
GAAGCTCACA
(
2
)
1.9
0.0019
E12.5 retina
TGGTTCTGGG
(
7
)
1.9
0.0019
E14.5 retina
CAGGCAAAAC (
40
)
12.8
0.0128
E14.5 retina
GAAACCTCAA
3.6
0.0036
E14.5 retina
TGGTTCTGGG
(
7
)
1.8
0.0018
E16.5 retina
CAGGCAAAAC (
40
)
9.1
0.0091
E16.5 retina
ATGTCTCTTC
(
3
)
3.6
0.0036
E16.5 retina
GAAGCTCACA
(
2
)
1.8
0.0018
E16.5 retina
GAGGAGTCTG
(
5
)
1.8
0.0018
E16.5 retina
TGGTTCTGGG
(
7
)
1.8
0.0018
E18.5 retina
CAGGCAAAAC (
40
)
12.7
0.0127
E18.5 retina
ATGTCTCTTC
(
3
)
3.6
0.0036
E18.5 retina
CAAGCAAAAA (
5
)
1.8
0.0018
P0.5 retina
CAGGCAAAAC (
40
)
13.7
0.0137
P0.5 retina
GAAACCTCAA
3.9
0.0039
P0.5 retina
CAAGCAAAAA (
5
)
2
0.002
P0.5 retina
GAAGCTCACA
(
2
)
2
0.002
P2.5 retina
CAGGCAAAAC (
40
)
24.6
0.0246
P4.5 retina
CAGGCAAAAC (
40
)
13.9
0.0139
P4.5 retina
ATGTCTCTTC
(
3
)
2
0.002
P4.5 retina
GAGGAGTCTG
(
5
)
2
0.002
P6.5 retina
CAGGCAAAAC (
40
)
16.7
0.0167
P6.5 retina
GAAACCTCAA
1.7
0.0017
P10.5 crx- retina
CAGGCAAAAC (
40
)
11.1
0.0111
P10.5 crx- retina
GCTGTGAGCT
(
4
)
3.7
0.0037
P10.5 crx+ retina
CAGGCAAAAC (
40
)
13.5
0.0135
P10.5 crx+ retina
CCTGCCTGCC (
9
)
1.9
0.0019
P10.5 crx+ retina
GAAACCTCAA
1.9
0.0019
Adult retinal
CAGGCAAAAC (
40
)
11.1
0.0111
Adult retinal
CAGGCAAACC (
7
)
3.7
0.0037
Adult retinal
CCTGCCTGCC (
9
)
3.7
0.0037
Adult retinal
GAAGCTCACA
(
2
)
3.7
0.0037
Adult retinal
TGGTTCTGGG
(
7
)
3.7
0.0037
ONL
CAGGCAAAAC (
40
)
34.5
0.0345
ONL
CAGGCAAACC (
7
)
1.9
0.0019
ONL
GAGGAGTCTG
(
5
)
1.9
0.0019
ONL
TGGTTCTGGG
(
7
)
1.9
0.0019
