Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.251087
2010316F05Rik
RIKEN cDNA 2010316F05 gene
11
67939
Human Homolog
LOC344405[similar to RIKEN cDNA 2010316F05]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 74 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
GGGGCTCACA (
10
)
1.6
0.0016
P8 Cb GC
GTGGCTCCCA (
14
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
GTGGCTCCCA (
14
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
GTGGCTCCCA (
14
)
3.4
0.0034
P8 GC+1d culture
GGGGCTCACA (
10
)
2.3
0.0023
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
GTGGCTCCCA (
14
)
2.3
0.0023
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
GTGGGCTCAC
(
14
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
GGGGCTCACA (
10
)
54.4
0.0544
E15 cortex
GTGGGCTCAC
(
14
)
9.9
0.0099
E15 cortex
GTGGCTCCCA (
14
)
4.9
0.0049
E15 cortex
TAGGTGCTAG (
7
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
GTGGCTCCCA (
14
)
18.2
0.0182
P1 cortex
GGGGCTCACA (
10
)
13.6
0.0136
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
GGGGCTCACA (
10
)
36.2
0.0362
Hypothalamus
GTGGCTCCCA (
14
)
10.9
0.0109
Hypothalamus
GTGGGCTCAC
(
14
)
3.6
0.0036
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
GGGGCTCACA (
10
)
35.7
0.0357
E12.5 retina
GTGGCTCCCA (
14
)
16.9
0.0169
E12.5 retina
GTGGGCTCAC
(
14
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
GGGGCTCACA (
10
)
54.7
0.0547
E14.5 retina
GTGGCTCCCA (
14
)
16.4
0.0164
E14.5 retina
TAGGTGCTAG (
7
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
GGGGCTCACA (
10
)
36.2
0.0362
E16.5 retina
GTGGCTCCCA (
14
)
9.1
0.0091
E16.5 retina
GTGGGCTCAC
(
14
)
5.4
0.0054
E16.5 retina
TAGGTGCTAG (
7
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
GGGGCTCACA (
10
)
72.8
0.0728
E18.5 retina
GTGGCTCCCA (
14
)
20
0.02
E18.5 retina
TAGGTGCTAG (
7
)
3.6
0.0036
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
GGGGCTCACA (
10
)
37.3
0.0373
P0.5 retina
GTGGCTCCCA (
14
)
9.8
0.0098
P0.5 retina
GTGGGCTCAC
(
14
)
3.9
0.0039
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
GGGGCTCACA (
10
)
65.1
0.0651
P2.5 retina
GTGGCTCCCA (
14
)
26.4
0.0264
P2.5 retina
GTGGGCTCAC
(
14
)
5.3
0.0053
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
GGGGCTCACA (
10
)
27.7
0.0277
P4.5 retina
GTGGCTCCCA (
14
)
9.9
0.0099
P4.5 retina
GTGGGCTCAC
(
14
)
7.9
0.0079
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
GGGGCTCACA (
10
)
43.4
0.0434
P6.5 retina
GTGGCTCCCA (
14
)
15
0.015
P6.5 retina
GTGGGCTCAC
(
14
)
3.3
0.0033
P6.5 retina
TAGGTGCTAG (
7
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
GGGGCTCACA (
10
)
24.2
0.0242
P10.5 crx- retina
GTGGCTCCCA (
14
)
14.9
0.0149
P10.5 crx- retina
GTGGGCTCAC
(
14
)
5.6
0.0056
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
GGGGCTCACA (
10
)
17.3
0.0173
P10.5 crx+ retina
GTGGCTCCCA (
14
)
11.5
0.0115
P10.5 crx+ retina
GTGGGCTCAC
(
14
)
5.8
0.0058
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
GGGGCTCACA (
10
)
31.5
0.0315
Adult retinal
GTGGCTCCCA (
14
)
14.8
0.0148
Adult retinal
GTGGGCTCAC
(
14
)
7.4
0.0074
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
GGGGCTCACA (
10
)
38.3
0.0383
ONL
GTGGCTCCCA (
14
)
28.7
0.0287
ONL
GTGGGCTCAC
(
14
)
5.7
0.0057
