Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.25311
1810015C04Rik
RIKEN cDNA 1810015C04 gene
15
66270
Gene Ontology
integral to membrane
Human Homolog
FLJ20152[hypothetical protein FLJ20152]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 85 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCCACCCACT (
6
)
8.2
0.0082
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
Cb medulloblastoma
CCCACCCACT (
6
)
11.6
0.0116
Cb medulloblastoma
ACGGTGCCAT (
4
)
2.3
0.0023
Cb medulloblastoma
CAAGACCCTG
(
7
)
2.3
0.0023
Cb medulloblastoma
GAAATGAACT
(
2
)
2.3
0.0023
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
ACGGTGCCAT (
4
)
5.7
0.0057
P8 GC+1d culture
CCCACCCACT (
6
)
4.6
0.0046
P8 GC+1d culture
CTACACTGAC (
4
)
4.6
0.0046
P8 GC+1d culture
TACATTGTGT
2.3
0.0023
P8 GC+1d culture
CAAGACCCTG
(
7
)
1.1
0.0011
P8 GC+1d culture
CTTTTTCCTT (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
CCCACCCACT (
6
)
9.4
0.0094
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
CTACACTGAC (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
ACGGTGCCAT (
4
)
1.2
0.0012
3T3 fibroblasts
CCCACCCACT (
6
)
17.5
0.0175
3T3 fibroblasts
ACGGTGCCAT (
4
)
3.5
0.0035
E15 cortex
CCCACCCACT (
6
)
14.8
0.0148
E15 cortex
CTACACTGAC (
4
)
4.9
0.0049
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
CCCACCCACT (
6
)
4.5
0.0045
P1 cortex
CTACACTGAC (
4
)
4.5
0.0045
P1 cortex
CTTATTACAG
(
3
)
4.5
0.0045
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
CCCACCCACT (
6
)
14.5
0.0145
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
Hypothalamus
AACACACACA (
24
)
5.4
0.0054
Hypothalamus
ACGGTGCCAT (
4
)
1.8
0.0018
Hypothalamus
CAAGACCCTG
(
7
)
1.8
0.0018
Hypothalamus
CTACACTGAC (
4
)
1.8
0.0018
Hypothalamus
TACATTGTGT
1.8
0.0018
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E12.5 retina
CCCACCCACT (
6
)
1.9
0.0019
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E14.5 retina
CTACACTGAC (
4
)
5.5
0.0055
E14.5 retina
ACGGTGCCAT (
4
)
3.6
0.0036
E14.5 retina
CCCACCCACT (
6
)
3.6
0.0036
E14.5 retina
AACACACACA (
24
)
1.8
0.0018
E14.5 retina
TACATTGTGT
1.8
0.0018
E16.5 retina
CCCACCCACT (
6
)
7.2
0.0072
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
ACGGTGCCAT (
4
)
3.6
0.0036
E16.5 retina
AACACACACA (
24
)
1.8
0.0018
E16.5 retina
CTACACTGAC (
4
)
1.8
0.0018
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
E18.5 retina
TACATTGTGT
1.8
0.0018
P0.5 retina
CCCACCCACT (
6
)
9.8
0.0098
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P0.5 retina
CAAGACCCTG
(
7
)
3.9
0.0039
P0.5 retina
ACGGTGCCAT (
4
)
2
0.002
P0.5 retina
CTTTTTCCTT (
7
)
2
0.002
P2.5 retina
CCCACCCACT (
6
)
8.8
0.0088
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
CTACACTGAC (
4
)
3.5
0.0035
P2.5 retina
CTTTTTCCTT (
7
)
3.5
0.0035
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P4.5 retina
AACACACACA (
24
)
2
0.002
P4.5 retina
CCCACCCACT (
6
)
2
0.002
P6.5 retina
CCCACCCACT (
6
)
10
0.01
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
CAAGACCCTG
(
7
)
3.3
0.0033
P6.5 retina
CTACACTGAC (
4
)
3.3
0.0033
P6.5 retina
AACACACACA (
24
)
1.7
0.0017
P6.5 retina
TACATTGTGT
1.7
0.0017
P10.5 crx- retina
CCCACCCACT (
6
)
24.2
0.0242
P10.5 crx- retina
CTACACTGAC (
4
)
7.4
0.0074
P10.5 crx- retina
CAAGACCCTG
(
7
)
5.6
0.0056
P10.5 crx- retina
ACGGTGCCAT (
4
)
1.9
0.0019
P10.5 crx+ retina
CCCACCCACT (
6
)
11.5
0.0115
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
P10.5 crx+ retina
AACACACACA (
24
)
1.9
0.0019
P10.5 crx+ retina
ACGGTGCCAT (
4
)
1.9
0.0019
P10.5 crx+ retina
CTACACTGAC (
4
)
1.9
0.0019
P10.5 crx+ retina
GAAATGAACT
(
2
)
1.9
0.0019
Adult retinal
CCCACCCACT (
6
)
13
0.013
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
AACACACACA (
24
)
3.7
0.0037
Adult retinal
ACGGTGCCAT (
4
)
1.9
0.0019
Adult retinal
CTACACTGAC (
4
)
1.9
0.0019
ONL
CCCACCCACT (
6
)
5.7
0.0057
ONL
AACACACACA (
24
)
3.8
0.0038
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
