Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.253264
6030408C04Rik
RIKEN cDNA 6030408C04 gene
12
217558
Gene Ontology
ligase activity
Human Homolog
KIAA1333[KIAA1333]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 71 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TATTGTTTAC
(
2
)
6.5
0.0065
P8 Cb GC
CTCCCACCTT (
15
)
3.3
0.0033
P8 Cb GC
ATTTTTATTC (
3
)
1.6
0.0016
Cb medulloblastoma
CTCCCACCTT (
15
)
13.9
0.0139
Cb medulloblastoma
TATTGTTTAC
(
2
)
6.9
0.0069
Cb medulloblastoma
GAAGAAAACA (
9
)
2.3
0.0023
P8 GC+1d culture
CTCCCACCTT (
15
)
9.1
0.0091
P8 GC+1d culture
TATTGTTTAC
(
2
)
9.1
0.0091
P8 GC+1d culture
CTTTTTTTTT (
25
)
3.4
0.0034
P8 GC+1d culture
GACACCAGAA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TATTGTTTAC
(
2
)
14.1
0.0141
P8 GC+SHH+1d culture
CTCCCACCTT (
15
)
8.2
0.0082
P8 GC+SHH+1d culture
GACACCAGAA
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
GAAGAAAACA (
9
)
1.2
0.0012
3T3 fibroblasts
CTCCCACCTT (
15
)
10.5
0.0105
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
TATTGTTTAC
(
2
)
3.5
0.0035
E15 cortex
CTCCCACCTT (
15
)
9.9
0.0099
E15 cortex
CTTTTTTTTT (
25
)
4.9
0.0049
E15 cortex
GAAGAAAACA (
9
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
GAAGAAAACA (
9
)
4.5
0.0045
P1 cortex
TATTGTTTAC
(
2
)
4.5
0.0045
Hypothalamus
CTCCCACCTT (
15
)
9.1
0.0091
Hypothalamus
TATTGTTTAC
(
2
)
7.2
0.0072
Hypothalamus
GAAGAAAACA (
9
)
1.8
0.0018
E12.5 retina
TATTGTTTAC
(
2
)
18.8
0.0188
E12.5 retina
CTCCCACCTT (
15
)
9.4
0.0094
E12.5 retina
GAAGAAAACA (
9
)
5.6
0.0056
E14.5 retina
TATTGTTTAC
(
2
)
18.2
0.0182
E14.5 retina
CTCCCACCTT (
15
)
12.8
0.0128
E14.5 retina
CTTTTTTTTT (
25
)
1.8
0.0018
E14.5 retina
GAAGAAAACA (
9
)
1.8
0.0018
E16.5 retina
CTCCCACCTT (
15
)
9.1
0.0091
E16.5 retina
TATTGTTTAC
(
2
)
9.1
0.0091
E16.5 retina
ATTACGCCAA (
233
)
1.8
0.0018
E16.5 retina
GAAGAAAACA (
9
)
1.8
0.0018
E18.5 retina
CTCCCACCTT (
15
)
14.6
0.0146
E18.5 retina
TATTGTTTAC
(
2
)
7.3
0.0073
E18.5 retina
GAAGAAAACA (
9
)
3.6
0.0036
E18.5 retina
GACACCAGAA
(
3
)
1.8
0.0018
P0.5 retina
CTCCCACCTT (
15
)
11.8
0.0118
P0.5 retina
TATTGTTTAC
(
2
)
5.9
0.0059
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
ATTACGCCAA (
233
)
2
0.002
P0.5 retina
GACACCAGAA
(
3
)
2
0.002
P2.5 retina
CTCCCACCTT (
15
)
15.8
0.0158
P2.5 retina
TATTGTTTAC
(
2
)
10.6
0.0106
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
CTCCCACCTT (
15
)
37.6
0.0376
P4.5 retina
TATTGTTTAC
(
2
)
13.9
0.0139
P4.5 retina
GACACCAGAA
(
3
)
5.9
0.0059
P4.5 retina
ATTTTTATTC (
3
)
4
0.004
P4.5 retina
GAAGAAAACA (
9
)
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
CTCCCACCTT (
15
)
20
0.02
P6.5 retina
TATTGTTTAC
(
2
)
8.3
0.0083
P6.5 retina
GAAGAAAACA (
9
)
3.3
0.0033
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P10.5 crx- retina
CTCCCACCTT (
15
)
13
0.013
P10.5 crx- retina
TATTGTTTAC
(
2
)
7.4
0.0074
P10.5 crx- retina
CTTTTTTTTT (
25
)
1.9
0.0019
P10.5 crx+ retina
CTCCCACCTT (
15
)
21.1
0.0211
P10.5 crx+ retina
TATTGTTTAC
(
2
)
3.8
0.0038
Adult retinal
CTCCCACCTT (
15
)
35.2
0.0352
Adult retinal
TATTGTTTAC
(
2
)
5.6
0.0056
Adult retinal
ATTACGCCAA (
233
)
3.7
0.0037
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
CTCCCACCTT (
15
)
15.3
0.0153
ONL
TATTGTTTAC
(
2
)
7.7
0.0077
ONL
GTCATAGCTG (
590
)
5.7
0.0057
