Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.254027	Cln8	ceroid-lipofuscinosis, neuronal 8	8	8 6.0 cM	26889
Gene Ontology	endoplasmic reticulum | integral to membrane
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 114 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGGGCCCAG (8) 8.2 0.0082 P8 Cb GC ACTTTCCTCT (3) 6.5 0.0065 P8 Cb GC TTCCAGATTG (5) 6.5 0.0065 P8 Cb GC GGATGTCCTT (3) 3.3 0.0033 P8 Cb GC TGTGACTTAG 3.3 0.0033 P8 Cb GC AGGTTTTTGT (5) 1.6 0.0016 P8 Cb GC AGTAACCCAT 1.6 0.0016 P8 Cb GC ATTTTCAAGA (2) 1.6 0.0016 Cb medulloblastoma CTGGGCCCAG (8) 9.2 0.0092 Cb medulloblastoma ACTTTCCTCT (3) 4.6 0.0046 Cb medulloblastoma ATTTTCAAAA (5) 4.6 0.0046 Cb medulloblastoma TGTGACTTAG 2.3 0.0023 P8 GC+1d culture CTGGGCCCAG (8) 19.4 0.0194 P8 GC+1d culture TTCCAGATTG (5) 10.3 0.0103 P8 GC+1d culture GAGGACAAGG (3) 3.4 0.0034 P8 GC+1d culture TGTGACTTAG 2.3 0.0023 P8 GC+1d culture AAGTATTGCT 1.1 0.0011 P8 GC+1d culture AGGTTTTTGT (5) 1.1 0.0011 P8 GC+1d culture ATTTTCAAAA (5) 1.1 0.0011 P8 GC+1d culture ATTTTCAAGA (2) 1.1 0.0011 P8 GC+1d culture GGATGTCCTT (3) 1.1 0.0011 P8 GC+SHH+1d culture CTGGGCCCAG (8) 11.7 0.0117 P8 GC+SHH+1d culture ATTTTCAAAA (5) 8.2 0.0082 P8 GC+SHH+1d culture ACTTTCCTCT (3) 5.9 0.0059 P8 GC+SHH+1d culture GAGGACAAGG (3) 5.9 0.0059 P8 GC+SHH+1d culture TGTGACTTAG 4.7 0.0047 P8 GC+SHH+1d culture TTCCAGATTG (5) 2.3 0.0023 P8 GC+SHH+1d culture AGTAACCCAT 1.2 0.0012 P8 GC+SHH+1d culture ATTTTCAAGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GGATGTCCTT (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGACTCAGA (3) 1.2 0.0012 3T3 fibroblasts CTGGGCCCAG (8) 7 0.007 3T3 fibroblasts ACTTTCCTCT (3) 3.5 0.0035 3T3 fibroblasts GTGACTCAGA (3) 3.5 0.0035 E15 cortex ACTTTCCTCT (3) 4.9 0.0049 P1 cortex CTGGGCCCAG (8) 13.6 0.0136 P1 cortex AGTAACCCAT 4.5 0.0045 Hypothalamus CTGGGCCCAG (8) 25.4 0.0254 Hypothalamus ACTTTCCTCT (3) 5.4 0.0054 Hypothalamus GGATGTCCTT (3) 5.4 0.0054 Hypothalamus TTCCAGATTG (5) 5.4 0.0054 Hypothalamus TGTGACTTAG 3.6 0.0036 Hypothalamus AGTAACCCAT 1.8 0.0018 Hypothalamus ATTTTCAAAA (5) 1.8 0.0018 E12.5 retina ACTTTCCTCT (3) 5.6 0.0056 E12.5 retina AATTTCAAGA (2) 3.8 0.0038 E12.5 retina AGGTTTTTGT (5) 1.9 0.0019 E12.5 retina CTGGGCCCAG (8) 1.9 0.0019 E14.5 retina ACTTTCCTCT (3) 7.3 0.0073 E14.5 retina CTGGGCCCAG (8) 7.3 0.0073 E14.5 retina AAGTATTGCT 1.8 0.0018 E14.5 retina AATTTCAAGA (2) 1.8 0.0018 E14.5 retina ATTTTCAAAA (5) 1.8 0.0018 E14.5 retina CAGGGATGGT (2) 1.8 0.0018 E16.5 retina TTCCAGATTG (5) 14.5 0.0145 E16.5 retina ACTTTCCTCT (3) 10.9 0.0109 E16.5 retina ATTTTCAAAA (5) 3.6 0.0036 E16.5 retina CTGGGCCCAG (8) 3.6 0.0036 E16.5 retina GGATGTCCTT (3) 1.8 0.0018 E16.5 retina TGTGACTTAG 1.8 0.0018 E18.5 retina ACTTTCCTCT (3) 5.5 0.0055 E18.5 retina AAGTATTGCT 3.6 0.0036 E18.5 retina CTGGGCCCAG (8) 3.6 0.0036 E18.5 retina AGTAACCCAT 1.8 0.0018 E18.5 retina ATTTTCAAGA (2) 1.8 0.0018 E18.5 retina GGATGTCCTT (3) 1.8 0.0018 E18.5 retina TGTGACTTAG 1.8 0.0018 E18.5 retina TTCCAGATTG (5) 1.8 0.0018 P0.5 retina CTGGGCCCAG (8) 7.9 0.0079 P0.5 retina GGATGTCCTT (3) 3.9 0.0039 P0.5 retina ACTTTCCTCT (3) 2 0.002 P0.5 retina ATTTTCAAAA (5) 2 0.002 P0.5 retina GAGGACAAGG (3) 2 0.002 P0.5 retina GTGACTCAGA (3) 2 0.002 P0.5 retina TGTGACTTAG 2 0.002 P0.5 retina TTCCAGATTG (5) 2 0.002 P2.5 retina CTGGGCCCAG (8) 15.8 0.0158 P2.5 retina ACTTTCCTCT (3) 12.3 0.0123 P2.5 retina ATTTTCAAAA (5) 5.3 0.0053 P2.5 retina TTCCAGATTG (5) 3.5 0.0035 P2.5 retina AAGTATTGCT 1.8 0.0018 P2.5 retina AGGTTTTTGT (5) 1.8 0.0018 P2.5 retina GGATGTCCTT (3) 1.8 0.0018 P4.5 retina CTGGGCCCAG (8) 11.9 0.0119 P4.5 retina ACTTTCCTCT (3) 7.9 0.0079 P4.5 retina ATTTTCAAAA (5) 5.9 0.0059 P4.5 retina TGTGACTTAG 4 0.004 P4.5 retina AAGTATTGCT 2 0.002 P6.5 retina CTGGGCCCAG (8) 11.7 0.0117 P6.5 retina TTCCAGATTG (5) 8.3 0.0083 P6.5 retina ACTTTCCTCT (3) 5 0.005 P6.5 retina TGTGACTTAG 3.3 0.0033 P6.5 retina AATTTCAAGA (2) 1.7 0.0017 P6.5 retina ATTTTCAAAA (5) 1.7 0.0017 P10.5 crx- retina ACTTTCCTCT (3) 5.6 0.0056 P10.5 crx- retina TTCCAGATTG (5) 5.6 0.0056 P10.5 crx- retina GGATGTCCTT (3) 3.7 0.0037 P10.5 crx- retina CTGGGCCCAG (8) 1.9 0.0019 P10.5 crx- retina TGTGACTTAG 1.9 0.0019 P10.5 crx+ retina CTGGGCCCAG (8) 23.1 0.0231 P10.5 crx+ retina TTCCAGATTG (5) 7.7 0.0077 P10.5 crx+ retina AATTTCAAGA (2) 1.9 0.0019 P10.5 crx+ retina ACTTTCCTCT (3) 1.9 0.0019 P10.5 crx+ retina GTGACTCAGA (3) 1.9 0.0019 P10.5 crx+ retina TGTGACTTAG 1.9 0.0019 Adult retinal CTGGGCCCAG (8) 13 0.013 Adult retinal GAGGACAAGG (3) 5.6 0.0056 Adult retinal ACTTTCCTCT (3) 3.7 0.0037 Adult retinal AGGTTTTTGT (5) 1.9 0.0019 ONL ACTTTCCTCT (3) 3.8 0.0038 ONL ATTTTCAAAA (5) 3.8 0.0038 ONL CAGGGATGGT (2) 3.8 0.0038 ONL GGATGTCCTT (3) 3.8 0.0038 ONL TGTGACTTAG 1.9 0.0019