Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.254027	Cln8	ceroid-lipofuscinosis, neuronal 8	8	8 6.0 cM	26889
Gene Ontology	endoplasmic reticulum | integral to membrane
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 114 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTTTCCTCT (3) AGGTTTTTGT (3) AGTAACCCAT ATTTTCAAGA (2) CTGGGCCCAG (2) GGATGTCCTT TGTGACTTAG TTCCAGATTG (2) 32.6 0.0326 Cb medulloblastoma ACTTTCCTCT (3) ATTTTCAAAA (2) CTGGGCCCAG (2) TGTGACTTAG 20.7 0.0207 P8 GC+1d culture AAGTATTGCT AGGTTTTTGT (3) ATTTTCAAAA (2) ATTTTCAAGA (2) CTGGGCCCAG (2) GAGGACAAGG GGATGTCCTT TGTGACTTAG TTCCAGATTG (2) 40.9 0.0409 P8 GC+SHH+1d culture ACTTTCCTCT (3) AGTAACCCAT ATTTTCAAAA (2) ATTTTCAAGA (2) CTGGGCCCAG (2) GAGGACAAGG GGATGTCCTT GTGACTCAGA TGTGACTTAG TTCCAGATTG (2) 43.5 0.0435 3T3 fibroblasts ACTTTCCTCT (3) CTGGGCCCAG (2) GTGACTCAGA 14 0.014 E15 cortex ACTTTCCTCT (3) 4.9 0.0049 P1 cortex AGTAACCCAT CTGGGCCCAG (2) 18.1 0.0181 Hypothalamus ACTTTCCTCT (3) AGTAACCCAT ATTTTCAAAA (2) CTGGGCCCAG (2) GGATGTCCTT TGTGACTTAG TTCCAGATTG (2) 48.8 0.0488 E12.5 retina AATTTCAAGA ACTTTCCTCT (3) AGGTTTTTGT (3) CTGGGCCCAG (2) 13.2 0.0132 E14.5 retina AAGTATTGCT AATTTCAAGA ACTTTCCTCT (3) ATTTTCAAAA (2) CAGGGATGGT (2) CTGGGCCCAG (2) 21.8 0.0218 E16.5 retina ACTTTCCTCT (3) ATTTTCAAAA (2) CTGGGCCCAG (2) GGATGTCCTT TGTGACTTAG TTCCAGATTG (2) 36.2 0.0362 E18.5 retina AAGTATTGCT ACTTTCCTCT (3) AGTAACCCAT ATTTTCAAGA (2) CTGGGCCCAG (2) GGATGTCCTT TGTGACTTAG TTCCAGATTG (2) 21.7 0.0217 P0.5 retina ACTTTCCTCT (3) ATTTTCAAAA (2) CTGGGCCCAG (2) GAGGACAAGG GGATGTCCTT GTGACTCAGA TGTGACTTAG TTCCAGATTG (2) 23.8 0.0238 P2.5 retina AAGTATTGCT ACTTTCCTCT (3) AGGTTTTTGT (3) ATTTTCAAAA (2) CTGGGCCCAG (2) GGATGTCCTT TTCCAGATTG (2) 42.3 0.0423 P4.5 retina AAGTATTGCT ACTTTCCTCT (3) ATTTTCAAAA (2) CTGGGCCCAG (2) TGTGACTTAG 31.7 0.0317 P6.5 retina AATTTCAAGA ACTTTCCTCT (3) ATTTTCAAAA (2) CTGGGCCCAG (2) TGTGACTTAG TTCCAGATTG (2) 31.7 0.0317 P10.5 crx- retina ACTTTCCTCT (3) CTGGGCCCAG (2) GGATGTCCTT TGTGACTTAG TTCCAGATTG (2) 18.7 0.0187 P10.5 crx+ retina AATTTCAAGA ACTTTCCTCT (3) CTGGGCCCAG (2) GTGACTCAGA TGTGACTTAG TTCCAGATTG (2) 38.4 0.0384 Adult retinal ACTTTCCTCT (3) AGGTTTTTGT (3) CTGGGCCCAG (2) GAGGACAAGG 24.2 0.0242 ONL ACTTTCCTCT (3) ATTTTCAAAA (2) CAGGGATGGT (2) GGATGTCCTT TGTGACTTAG 17.1 0.0171