Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.254134	Gpiap1	GPI-anchored membrane protein 1	2		53872
Human Homolog	M11S1[membrane component, chromosome 11, surface marker 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAGTGCCTG (3) ACCTTCCAAT CATTGCTAGT GCCTCGGTCT (2) TTTCTAAAAA (2) TTTTCTCCTG 22.7 0.0227 Cb medulloblastoma ACAGTGCCTG (3) TTTCTAAAAA (2) 11.5 0.0115 P8 GC+1d culture ACAGTGCCTG (3) ACCTTCCAAT CATTGCTAGT GAGAAATAAT TTTCTAAAAA (2) 23.8 0.0238 P8 GC+SHH+1d culture ACAGTGCCTG (3) ACCTTCCAAT GAGAAATAAT TAATAAATTA (2) TTTAGTTTTT (2) TTTCTAAAAA (2) 22.3 0.0223 3T3 fibroblasts ACAGTGCCTG (3) TTCTGTCCTA 7 0.007 E15 cortex ACAGTGCCTG (3) ACCTTCCAAT 14.8 0.0148 P1 cortex ACAGTGCCTG (3) CGGGAAATAC TAATAAATTA (2) TTTCTAAAAA (2) 18 0.018 Hypothalamus AAATGCTACC ACAGTGCCTG (3) CATTGCTAGT TAATAAATTA (2) TTTTCTCCTG 18.1 0.0181 E12.5 retina ACAGTGCCTG (3) CGGGAAATAC GAGAAATAAT GCCTCGGTCT (2) TTTAGTTTTT (2) TTTCTAAAAA (2) TTTCTAAAAG TTTTCTCCTG 34 0.034 E14.5 retina AAATGCTACC ACAGTGCCTG (3) ACCTTCCAAT GAGAAATAAT GAGCTCACAT TTCTGTCCTA TTTCTAAAAA (2) TTTCTAAAAG 32.6 0.0326 E16.5 retina ACAGTGCCTG (3) GAGAAATAAT TTTAGTTTTT (2) 16.3 0.0163 E18.5 retina ACAGTGCCTG (3) GAGAAATAAT GAGCTCACAT GCCTCGGTCT (2) TAATAAATTA (2) TTTCTAAAAA (2) TTTCTAAAAG 34.5 0.0345 P0.5 retina ACAGTGCCTG (3) GAGAAATAAT TTCTGTCCTA TTTCTAAAAG 15.8 0.0158 P2.5 retina ACAGTGCCTG (3) GAGAAATAAT GCCTCGGTCT (2) TTTCTAAAAA (2) 22.9 0.0229 P4.5 retina ACAGTGCCTG (3) ACCTTCCAAT GAGAAATAAT TTTCTAAAAA (2) TTTCTAAAAG 29.8 0.0298 P6.5 retina ACAGTGCCTG (3) ACCTTCCAAT GAGCTCACAT TTCTGTCCTA TTTAGTTTTT (2) TTTCTAAAAA (2) 31.8 0.0318 P10.5 crx- retina ACAGTGCCTG (3) TTCTGTCCTA 9.3 0.0093 P10.5 crx+ retina AAATGCTACC ACAGTGCCTG (3) CATTGCTAGT GAGAAATAAT GAGCTCACAT 28.7 0.0287 Adult retinal ACAGTGCCTG (3) GAGAAATAAT TTTCTAAAAA (2) 5.7 0.0057 ONL ACAGTGCCTG (3) ACCTTCCAAT TTTCTAAAAG TTTTCTCCTG 7.6 0.0076