Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.258051
Nupl1
nucleoporin like 1
14
71844
Mm.258051
BC010981
cDNA sequence BC010981
407830
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 27 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTACTGTGTA
(
2
)
3.3
0.0033
Cb medulloblastoma
CACATTGGTT
(
2
)
2.3
0.0023
P8 GC+1d culture
CACATTGGTT
(
2
)
TGTTCATTCC
(
2
)
TTACTGTGTA
(
2
)
3.3
0.0033
P8 GC+SHH+1d culture
CACATTGGTT
(
2
)
1.2
0.0012
P1 cortex
TTACTGTGTA
(
2
)
13.6
0.0136
Hypothalamus
GAATTGCACG
(
2
)
TTACTGTGTA
(
2
)
3.6
0.0036
E14.5 retina
GAATTGCACG
(
2
)
TGTTCATTCC
(
2
)
TTACTGTGTA
(
2
)
5.4
0.0054
E16.5 retina
AGGCCGAGAA
(
2
)
1.8
0.0018
E18.5 retina
TTACTGTGTA
(
2
)
1.8
0.0018
P0.5 retina
TTACTGTGTA
(
2
)
11.8
0.0118
P2.5 retina
TTACTGTGTA
(
2
)
1.8
0.0018
P4.5 retina
AGGCCGAGAA
(
2
)
CACATTGGTT
(
2
)
GAATTGCACG
(
2
)
8
0.008
P6.5 retina
GAATTGCACG
(
2
)
TTACTGTGTA
(
2
)
11.7
0.0117
P10.5 crx- retina
GAATTGCACG
(
2
)
3.7
0.0037
P10.5 crx+ retina
AGGCCGAGAA
(
2
)
GAATTGCACG
(
2
)
TTACTGTGTA
(
2
)
11.5
0.0115
Adult retinal
GAATTGCACG
(
2
)
1.9
0.0019
ONL
TGTTCATTCC
(
2
)
1.9
0.0019
