Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.258476	Tbl1x	transducin (beta)-like 1 X-linked	X	X 30.9 cM	21372
Gene Ontology	nucleus | regulation of transcription, DNA-dependent
Human Homolog	TBL1X[transducin (beta)-like 1X-linked]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTTTACAAT (5) 4.9 0.0049 P8 Cb GC ACCTCCAGGC (6) 3.3 0.0033 P8 Cb GC CAATAAATAA (3) 1.6 0.0016 P8 Cb GC CACACAGTGG (6) 1.6 0.0016 Cb medulloblastoma GCAATAAATA (4) 9.2 0.0092 Cb medulloblastoma ACCTCCAGGC (6) 6.9 0.0069 Cb medulloblastoma ACTTTACAAT (5) 4.6 0.0046 P8 GC+1d culture ACCTCCAGGC (6) 3.4 0.0034 P8 GC+1d culture ACTTTACAAT (5) 3.4 0.0034 P8 GC+1d culture GCAATAAATA (4) 2.3 0.0023 P8 GC+1d culture ATGTTCCCAG (5) 1.1 0.0011 P8 GC+1d culture CACACAGTGG (6) 1.1 0.0011 P8 GC+1d culture GTCCTCTTTC (3) 1.1 0.0011 P8 GC+1d culture GTTGGTTTCC (3) 1.1 0.0011 P8 GC+SHH+1d culture ACTTTACAAT (5) 5.9 0.0059 P8 GC+SHH+1d culture GTCCTCTTTC (3) 4.7 0.0047 P8 GC+SHH+1d culture GCAATAAATA (4) 2.3 0.0023 P8 GC+SHH+1d culture ATGTTCCCAG (5) 1.2 0.0012 P8 GC+SHH+1d culture CAATAAATAA (3) 1.2 0.0012 P8 GC+SHH+1d culture CACACAGTGG (6) 1.2 0.0012 P8 GC+SHH+1d culture TGTCAGGAAA (2) 1.2 0.0012 3T3 fibroblasts CACACAGTGG (6) 10.5 0.0105 3T3 fibroblasts ACCTCCAGGC (6) 7 0.007 E15 cortex GTTGGTTTCC (3) 4.9 0.0049 P1 cortex GTCCTCTTTC (3) 9.1 0.0091 P1 cortex ACCTCCAGGC (6) 4.5 0.0045 P1 cortex ATGTTCCCAG (5) 4.5 0.0045 P1 cortex CACACAGTGG (6) 4.5 0.0045 P1 cortex GGTTTGGTAA 4.5 0.0045 Hypothalamus ACCTCCAGGC (6) 9.1 0.0091 Hypothalamus GCAATAAATA (4) 7.2 0.0072 Hypothalamus ACTTTACAAT (5) 1.8 0.0018 Hypothalamus ATGTTCCCAG (5) 1.8 0.0018 Hypothalamus TGTCAGGAAA (2) 1.8 0.0018 E12.5 retina ACTTTACAAT (5) 5.6 0.0056 E12.5 retina CACACAGTGG (6) 5.6 0.0056 E12.5 retina GTCCTCTTTC (3) 5.6 0.0056 E12.5 retina CAATAAATAA (3) 3.8 0.0038 E12.5 retina GCAATAAATA (4) 1.9 0.0019 E12.5 retina TGTCAGGAAA (2) 1.9 0.0019 E14.5 retina ACCTCCAGGC (6) 5.5 0.0055 E14.5 retina ACTTTACAAT (5) 5.5 0.0055 E14.5 retina TGTCAGGAAA (2) 5.5 0.0055 E16.5 retina ACCTCCAGGC (6) 5.4 0.0054 E16.5 retina ACTTTACAAT (5) 5.4 0.0054 E16.5 retina GTCCTCTTTC (3) 3.6 0.0036 E16.5 retina GCAATAAATA (4) 1.8 0.0018 E16.5 retina TGTCAGGAAA (2) 1.8 0.0018 E18.5 retina GCAATAAATA (4) 5.5 0.0055 E18.5 retina TGTCAGGAAA (2) 3.6 0.0036 E18.5 retina GTTGGTTTCC (3) 1.8 0.0018 P0.5 retina ACTTTACAAT (5) 5.9 0.0059 P0.5 retina TTTGGCTGTA (2) 2 0.002 P2.5 retina ACCTCCAGGC (6) 5.3 0.0053 P2.5 retina GTCCTCTTTC (3) 5.3 0.0053 P2.5 retina GCAATAAATA (4) 3.5 0.0035 P2.5 retina CAATAAATAA (3) 1.8 0.0018 P2.5 retina CACACAGTGG (6) 1.8 0.0018 P2.5 retina TGTCAGGAAA (2) 1.8 0.0018 P4.5 retina ACTTTACAAT (5) 5.9 0.0059 P4.5 retina GCAATAAATA (4) 5.9 0.0059 P4.5 retina ACCTCCAGGC (6) 4 0.004 P4.5 retina CAATAAATAA (3) 2 0.002 P4.5 retina GGTTTGGTAA 2 0.002 P4.5 retina GTCCTCTTTC (3) 2 0.002 P4.5 retina TTTGGCTGTA (2) 2 0.002 P6.5 retina GCAATAAATA (4) 10 0.01 P6.5 retina GTCCTCTTTC (3) 3.3 0.0033 P6.5 retina ACCTCCAGGC (6) 1.7 0.0017 P6.5 retina ACTTTACAAT (5) 1.7 0.0017 P6.5 retina ATGTTCCCAG (5) 1.7 0.0017 P6.5 retina TGTCAGGAAA (2) 1.7 0.0017 P10.5 crx- retina ACCTCCAGGC (6) 11.1 0.0111 P10.5 crx- retina ACTTTACAAT (5) 5.6 0.0056 P10.5 crx- retina GTCCTCTTTC (3) 5.6 0.0056 P10.5 crx- retina GCAATAAATA (4) 3.7 0.0037 P10.5 crx- retina ATGTTCCCAG (5) 1.9 0.0019 P10.5 crx- retina CAATAAATAA (3) 1.9 0.0019 P10.5 crx+ retina GCAATAAATA (4) 7.7 0.0077 P10.5 crx+ retina ACTTTACAAT (5) 5.8 0.0058 P10.5 crx+ retina ACCTCCAGGC (6) 1.9 0.0019 P10.5 crx+ retina GGTTTGGTAA 1.9 0.0019 P10.5 crx+ retina TGTCAGGAAA (2) 1.9 0.0019 Adult retinal ACCTCCAGGC (6) 18.5 0.0185 Adult retinal GGTTTGGTAA 3.7 0.0037 Adult retinal ACTTTACAAT (5) 1.9 0.0019 Adult retinal GCAATAAATA (4) 1.9 0.0019 ONL ACCTCCAGGC (6) 11.5 0.0115 ONL GCAATAAATA (4) 9.6 0.0096 ONL ACTTTACAAT (5) 1.9 0.0019 ONL ATGTTCCCAG (5) 1.9 0.0019 ONL CAATAAATAA (3) 1.9 0.0019 ONL TTTGGCTGTA (2) 1.9 0.0019