Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.258476	Tbl1x	transducin (beta)-like 1 X-linked	X	X 30.9 cM	21372
Gene Ontology	nucleus | regulation of transcription, DNA-dependent
Human Homolog	TBL1X[transducin (beta)-like 1X-linked]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCTCCAGGC (3) ACTTTACAAT (2) CAATAAATAA (2) CACACAGTGG (2) 11.4 0.0114 Cb medulloblastoma ACCTCCAGGC (3) ACTTTACAAT (2) GCAATAAATA 20.7 0.0207 P8 GC+1d culture ACCTCCAGGC (3) ACTTTACAAT (2) ATGTTCCCAG (2) CACACAGTGG (2) GCAATAAATA GTCCTCTTTC GTTGGTTTCC 13.5 0.0135 P8 GC+SHH+1d culture ACTTTACAAT (2) ATGTTCCCAG (2) CAATAAATAA (2) CACACAGTGG (2) GCAATAAATA GTCCTCTTTC TGTCAGGAAA 17.7 0.0177 3T3 fibroblasts ACCTCCAGGC (3) CACACAGTGG (2) 17.5 0.0175 E15 cortex GTTGGTTTCC 4.9 0.0049 P1 cortex ACCTCCAGGC (3) ATGTTCCCAG (2) CACACAGTGG (2) GGTTTGGTAA GTCCTCTTTC 27.1 0.0271 Hypothalamus ACCTCCAGGC (3) ACTTTACAAT (2) ATGTTCCCAG (2) GCAATAAATA TGTCAGGAAA 21.7 0.0217 E12.5 retina ACTTTACAAT (2) CAATAAATAA (2) CACACAGTGG (2) GCAATAAATA GTCCTCTTTC TGTCAGGAAA 24.4 0.0244 E14.5 retina ACCTCCAGGC (3) ACTTTACAAT (2) TGTCAGGAAA 16.5 0.0165 E16.5 retina ACCTCCAGGC (3) ACTTTACAAT (2) GCAATAAATA GTCCTCTTTC TGTCAGGAAA 18 0.018 E18.5 retina GCAATAAATA GTTGGTTTCC TGTCAGGAAA 10.9 0.0109 P0.5 retina ACTTTACAAT (2) TTTGGCTGTA 7.9 0.0079 P2.5 retina ACCTCCAGGC (3) CAATAAATAA (2) CACACAGTGG (2) GCAATAAATA GTCCTCTTTC TGTCAGGAAA 19.5 0.0195 P4.5 retina ACCTCCAGGC (3) ACTTTACAAT (2) CAATAAATAA (2) GCAATAAATA GGTTTGGTAA GTCCTCTTTC TTTGGCTGTA 23.8 0.0238 P6.5 retina ACCTCCAGGC (3) ACTTTACAAT (2) ATGTTCCCAG (2) GCAATAAATA GTCCTCTTTC TGTCAGGAAA 20.1 0.0201 P10.5 crx- retina ACCTCCAGGC (3) ACTTTACAAT (2) ATGTTCCCAG (2) CAATAAATAA (2) GCAATAAATA GTCCTCTTTC 29.8 0.0298 P10.5 crx+ retina ACCTCCAGGC (3) ACTTTACAAT (2) GCAATAAATA GGTTTGGTAA TGTCAGGAAA 19.2 0.0192 Adult retinal ACCTCCAGGC (3) ACTTTACAAT (2) GCAATAAATA GGTTTGGTAA 26 0.026 ONL ACCTCCAGGC (3) ACTTTACAAT (2) ATGTTCCCAG (2) CAATAAATAA (2) GCAATAAATA TTTGGCTGTA 28.7 0.0287