| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCCTGAGGGT (3) GACAGCCAGG (2) TTGGCCAACC
| 9.8 | 0.0098 |
| Cb medulloblastoma | ACCTGCTGTG (2) GACAGCCAGG (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | CCCTGAGGGT (3) GACAGCCAGG (2) GGGTACCCAG
| 8 | 0.008 |
| P8 GC+SHH+1d culture | AAAGCCTGGA (2) CCCTGAGGGT (3) GACAGCCAGG (2)
| 10.6 | 0.0106 |
| 3T3 fibroblasts | ACCTGCTGTG (2) CCCTGAGGGT (3) GGGCTGGAAA (2)
| 21 | 0.021 |
| E15 cortex | AAAGCCTGGA (2) GACAGCCAGG (2) GAGAAAGACT (3) GGGCTGGAAA (2)
| 34.5 | 0.0345 |
| P1 cortex | CCCTGAGGGT (3) GACAGCCAGG (2) TTGGCCAACC
| 22.7 | 0.0227 |
| Hypothalamus | ACCTGCTGTG (2) CCCAGGAAAA CCCTGAGGGT (3) GACAGCCAGG (2) GCGGTGTATG GGGCTGGAAA (2) TTGGCCAACC
| 18 | 0.018 |
| E12.5 retina | CCCTGAGGGT (3) GACAGCCAGG (2)
| 3.8 | 0.0038 |
| E14.5 retina | AAAGCCTGGA (2) GACAGCCAGG (2) GGGTACCCAG
| 7.2 | 0.0072 |
| E16.5 retina | AAAGCCTGGA (2) CCCAGGAAAA CCCTGAGGGT (3) GACAGCCAGG (2) GAGAAAGACT (3) GGGCTGGAAA (2)
| 16.2 | 0.0162 |
| E18.5 retina | CCCAGGAAAA GAGGGGAAAA (2) GGGCTGGAAA (2)
| 5.4 | 0.0054 |
| P0.5 retina | CCCTGAGGGT (3) TTGGCCAACC
| 4 | 0.004 |
| P2.5 retina | CCCAGGAAAA CCCTGAGGGT (3) GACAGCCAGG (2) GGGCTGGAAA (2) TTGGCCAACC
| 15.9 | 0.0159 |
| P4.5 retina | CCCTGAGGGT (3) GACAGCCAGG (2) GGGCTGGAAA (2)
| 12 | 0.012 |
| P6.5 retina | ACCTGCTGTG (2) CCCAGGAAAA CCCTGAGGGT (3) GACAGCCAGG (2) GGGCTGGAAA (2)
| 15 | 0.015 |
| P10.5 crx- retina | CCCTGAGGGT (3) GACAGCCAGG (2) GCGGTGTATG GGGCTGGAAA (2) GGGTACCCAG
| 18.7 | 0.0187 |
| P10.5 crx+ retina | ACCTGCTGTG (2) CCCAGGAAAA CCCTGAGGGT (3) GACAGCCAGG (2) GAGAAAGACT (3) GAGGGGAAAA (2) GGGCTGGAAA (2)
| 21 | 0.021 |
| Adult retinal | ACCTGCTGTG (2) CCCTGAGGGT (3) GACAGCCAGG (2) GGGCTGGAAA (2) TTGGCCAACC
| 18.7 | 0.0187 |
| ONL | CCCTGAGGGT (3) GGGCTGGAAA (2) TTGGCCAACC
| 7.6 | 0.0076 |