Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.258708	AA536887	expressed sequence AA536887	7		101458
Mm.258708	AW742548	expressed sequence AW742548	7		101894
Mm.258708	3110018A08Rik	RIKEN cDNA 3110018A08 gene	7		73115
Mm.258708	Ebf3	early B-cell factor 3	7		13593
Gene Ontology	development | DNA binding | nucleus | positive regulation of transcription | protein binding | regulation of transcription, DNA-dependent
Human Homolog	DKFZp667B0210[early B-cell factor 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAGCGGCC (4) 9.8 0.0098 P8 Cb GC AGGACACTTG (6) 1.6 0.0016 P8 Cb GC CCCGCACCCG (4) 1.6 0.0016 P8 Cb GC TCGTTTTTTT (5) 1.6 0.0016 Cb medulloblastoma AACACTTGGA (7) 2.3 0.0023 P8 GC+1d culture CCCGCACCCG (4) 19.4 0.0194 P8 GC+1d culture TGAAGCGGCC (4) 6.8 0.0068 P8 GC+1d culture AGGACACTTG (6) 3.4 0.0034 P8 GC+SHH+1d culture CCCGCACCCG (4) 18.7 0.0187 P8 GC+SHH+1d culture AGGACACTTG (6) 3.5 0.0035 P8 GC+SHH+1d culture CTAATGAGAA (4) 1.2 0.0012 P8 GC+SHH+1d culture TCGTTTTTTT (5) 1.2 0.0012 P8 GC+SHH+1d culture TGAAGCGGCC (4) 1.2 0.0012 3T3 fibroblasts TGAAGCGGCC (4) 3.5 0.0035 E15 cortex CCCGCACCCG (4) 4.9 0.0049 P1 cortex TGAAGCGGCC (4) 4.5 0.0045 Hypothalamus AACACTTGGA (7) 1.8 0.0018 E12.5 retina AACACTGGCT (7) 1.9 0.0019 E12.5 retina AACACTTGGA (7) 1.9 0.0019 E12.5 retina CCCGCACCCG (4) 1.9 0.0019 E12.5 retina GCAGCCTCTT (11) 1.9 0.0019 E14.5 retina AACACTTGGA (7) 5.5 0.0055 E14.5 retina CCCGCACCCG (4) 5.5 0.0055 E14.5 retina GCAGCCTCTT (11) 1.8 0.0018 E16.5 retina CCCGCACCCG (4) 14.5 0.0145 E16.5 retina AGGACACTTG (6) 3.6 0.0036 P0.5 retina CCCGCACCCG (4) 11.8 0.0118 P0.5 retina CTAATGAGAA (4) 2 0.002 P2.5 retina AGGACACTTG (6) 1.8 0.0018 P2.5 retina CCCGCACCCG (4) 1.8 0.0018 P2.5 retina CTAATGAGAA (4) 1.8 0.0018 P2.5 retina TGAAGCGGCC (4) 1.8 0.0018 P4.5 retina CCCGCACCCG (4) 2 0.002 P4.5 retina GCAGCCTCTT (11) 2 0.002 P6.5 retina CCCGCACCCG (4) 10 0.01 P6.5 retina TGAAGCGGCC (4) 6.7 0.0067 P6.5 retina GCAGCCTCTT (11) 3.3 0.0033 P6.5 retina AACACTTGGA (7) 1.7 0.0017 P10.5 crx- retina CCCGCACCCG (4) 3.7 0.0037 P10.5 crx- retina GCAGCCTCTT (11) 1.9 0.0019 P10.5 crx+ retina CCCGCACCCG (4) 5.8 0.0058 P10.5 crx+ retina AACACTGGCT (7) 3.8 0.0038 P10.5 crx+ retina AACACTTGGA (7) 1.9 0.0019 P10.5 crx+ retina TGAAGCGGCC (4) 1.9 0.0019 Adult retinal AACACTTGGA (7) 5.6 0.0056 Adult retinal CCCGCACCCG (4) 3.7 0.0037 Adult retinal TCGTTTTTTT (5) 1.9 0.0019