Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.258708	AA536887	expressed sequence AA536887	7		101458
Mm.258708	AW742548	expressed sequence AW742548	7		101894
Mm.258708	3110018A08Rik	RIKEN cDNA 3110018A08 gene	7		73115
Mm.258708	Ebf3	early B-cell factor 3	7		13593
Gene Ontology	development | DNA binding | nucleus | positive regulation of transcription | protein binding | regulation of transcription, DNA-dependent
Human Homolog	DKFZp667B0210[early B-cell factor 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGACACTTG (4) CCCGCACCCG (4) TCGTTTTTTT TGAAGCGGCC (4) 14.6 0.0146 Cb medulloblastoma AACACTTGGA 2.3 0.0023 P8 GC+1d culture AGGACACTTG (4) CCCGCACCCG (4) TGAAGCGGCC (4) 29.6 0.0296 P8 GC+SHH+1d culture AGGACACTTG (4) CCCGCACCCG (4) CTAATGAGAA (4) TCGTTTTTTT TGAAGCGGCC (4) 25.8 0.0258 3T3 fibroblasts TGAAGCGGCC (4) 3.5 0.0035 E15 cortex CCCGCACCCG (4) 4.9 0.0049 P1 cortex TGAAGCGGCC (4) 4.5 0.0045 Hypothalamus AACACTTGGA 1.8 0.0018 E12.5 retina AACACTGGCT (2) AACACTTGGA CCCGCACCCG (4) GCAGCCTCTT (3) 7.6 0.0076 E14.5 retina AACACTTGGA CCCGCACCCG (4) GCAGCCTCTT (3) 12.8 0.0128 E16.5 retina AGGACACTTG (4) CCCGCACCCG (4) 18.1 0.0181 P0.5 retina CCCGCACCCG (4) CTAATGAGAA (4) 13.8 0.0138 P2.5 retina AGGACACTTG (4) CCCGCACCCG (4) CTAATGAGAA (4) TGAAGCGGCC (4) 7.2 0.0072 P4.5 retina CCCGCACCCG (4) GCAGCCTCTT (3) 4 0.004 P6.5 retina AACACTTGGA CCCGCACCCG (4) GCAGCCTCTT (3) TGAAGCGGCC (4) 21.7 0.0217 P10.5 crx- retina CCCGCACCCG (4) GCAGCCTCTT (3) 5.6 0.0056 P10.5 crx+ retina AACACTGGCT (2) AACACTTGGA CCCGCACCCG (4) TGAAGCGGCC (4) 13.4 0.0134 Adult retinal AACACTTGGA CCCGCACCCG (4) TCGTTTTTTT 11.2 0.0112