Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.258985	D16Bwg1543e	DNA segment, Chr 16, Brigham & Women's Genetics 1543 expressed	16	16 19.6 cM	52910
Mm.258985	2610529H08Rik	RIKEN cDNA 2610529H08 gene	16		67501
Human Homolog	C3orf6[chromosome 3 open reading frame 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATAATGTA (3) AGAGCAGCTC (4) CATTCCACGT (2) TGCTGTTAAC (3) 14.7 0.0147 Cb medulloblastoma AAATAATGTA (3) AGAGCAGCTC (4) GCCAGAGCAC (4) TGCTGTTAAC (3) 16.1 0.0161 P8 GC+1d culture AAAAATACAG (2) AAATAATGTA (3) CATTCCACGT (2) CCTATCTAGA (3) GCCAGAGCAC (4) GTGATATGTA (3) TGCTGTTAAC (3) TGGTTGAGGT (2) 23.7 0.0237 P8 GC+SHH+1d culture AAAAATACAG (2) AGAGCAGCTC (4) CATTCCACGT (2) CCTATCTAGA (3) GTGATATGTA (3) TGCTGTTAAC (3) 22.3 0.0223 3T3 fibroblasts AAATAATGTA (3) GCCAGAGCAC (4) 7 0.007 E15 cortex TGCTGTTAAC (3) 4.9 0.0049 Hypothalamus AAATAATGTA (3) TGCTGTTAAC (3) 7.2 0.0072 E12.5 retina AAATAATGTA (3) GTGATATGTA (3) TTTTTAAAAG (3) 5.7 0.0057 E14.5 retina AAATAATGTA (3) TGCTGTTAAC (3) 16.4 0.0164 E16.5 retina TGCTGTTAAC (3) 12.7 0.0127 E18.5 retina TGCTGTTAAC (3) 10.9 0.0109 P0.5 retina AAAAATACAG (2) TGCTGTTAAC (3) TGGTTGAGGT (2) 7.9 0.0079 P2.5 retina CCTATCTAGA (3) GCCAGAGCAC (4) TGCTGTTAAC (3) 14.1 0.0141 P4.5 retina TGCTGTTAAC (3) 7.9 0.0079 P6.5 retina AAATAATGTA (3) CCTATCTAGA (3) GCCAGAGCAC (4) TGCTGTTAAC (3) 10 0.01 P10.5 crx- retina CCTATCTAGA (3) TGCTGTTAAC (3) TTTTTAAAAG (3) 9.4 0.0094 P10.5 crx+ retina GCCAGAGCAC (4) TGCTGTTAAC (3) TGGTTGAGGT (2) 5.7 0.0057 Adult retinal AAATAATGTA (3) TGCTGTTAAC (3) 9.3 0.0093 ONL TTTTTAAAAG (3) 1.9 0.0019