Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.259223	Rpap1	RNA polymerase II associated protein 1	2		68925
Gene Ontology	biological_process unknown | protein binding | RNA polymerase complex
Human Homolog	RPAP1[RNA polymerase II associated protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 20 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 GC+1d culture ATACTGGAGC 4.6 0.0046 P8 GC+1d culture ATGTAATAAG 1.1 0.0011 P8 GC+SHH+1d culture ATACTGGAGC 1.2 0.0012 P8 GC+SHH+1d culture ATGTAATAAG 1.2 0.0012 P1 cortex ATACTGGAGC 4.5 0.0045 Hypothalamus ATACTGGAGC 3.6 0.0036 E12.5 retina ATACTGGAGC 3.8 0.0038 E14.5 retina ATACTGGAGC 3.6 0.0036 E14.5 retina TGGTGAAGGG 1.8 0.0018 E16.5 retina ATACTGGAGC 1.8 0.0018 E16.5 retina TGGTGAAGGG 1.8 0.0018 P0.5 retina ATACTGGAGC 7.9 0.0079 P0.5 retina TGGTGAAGGG 2 0.002 P2.5 retina ATACTGGAGC 1.8 0.0018 P2.5 retina ATGTAATAAG 1.8 0.0018 P4.5 retina ATACTGGAGC 2 0.002 P6.5 retina ATACTGGAGC 1.7 0.0017 P10.5 crx- retina ATACTGGAGC 1.9 0.0019 Adult retinal ATACTGGAGC 5.6 0.0056 ONL ATACTGGAGC 1.9 0.0019