Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.259278	Sumo1	SMT3 suppressor of mif two 3 homolog 1 (yeast)	1		22218
Mm.259278	D430013B06Rik	RIKEN cDNA D430013B06 gene	1		399594
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTTCTTCT (2) CTGGAACTTC (7) GGTTTTCAAG (2) TCTGACCAGG (2) TGGTTGCTTC (4) TTTGTAGTCA (2) 32.6 0.0326 Cb medulloblastoma GGTTTTCAAG (2) 9.2 0.0092 P8 GC+1d culture GGTTTTCAAG (2) TCTGACCAGG (2) TTTGTAGTCA (2) 21.7 0.0217 P8 GC+SHH+1d culture GGTTTTCAAG (2) TCTGACCAGG (2) TTTGTAGTCA (2) 18.8 0.0188 3T3 fibroblasts CTGGAACTTC (7) TGGTTGCTTC (4) TTTGTAGTCA (2) 10.5 0.0105 E15 cortex GGTTTTCAAG (2) TTTGTAGTCC (2) 19.7 0.0197 P1 cortex GGTTTTCAAG (2) 4.5 0.0045 Hypothalamus ATGTTCTTCT (2) CTGGAACTTC (7) GGTTTTCAAG (2) TCTGACCAGG (2) 27.1 0.0271 E12.5 retina CTGGAACTTC (7) GGTTTTCAAG (2) TCTGACCAGG (2) TTTGTAGTCA (2) 22.6 0.0226 E14.5 retina GGTTTTCAAG (2) 23.7 0.0237 E16.5 retina GGTTTTCAAG (2) TTTGTAGTCA (2) 29 0.029 E18.5 retina ATGTTCTTCT (2) CTGGAACTTC (7) GGTTTTCAAG (2) TGGTTGCTTC (4) TTTGTAGTCA (2) 49.1 0.0491 P0.5 retina CTGGAACTTC (7) GGTTTTCAAG (2) TCTGACCAGG (2) TTTGTAGTCA (2) 21.7 0.0217 P2.5 retina GGTTTTCAAG (2) 17.6 0.0176 P4.5 retina CTGGAACTTC (7) GGTTTTCAAG (2) 27.7 0.0277 P6.5 retina CTGGAACTTC (7) GGTTTTCAAG (2) 18.3 0.0183 P10.5 crx- retina CTGGAACTTC (7) GGTTTTCAAG (2) TTTGTAGTCA (2) 11.2 0.0112 P10.5 crx+ retina CTGGAACTTC (7) GGTTTTCAAG (2) TCTGACCAGG (2) 13.4 0.0134 Adult retinal CTGGAACTTC (7) GGTTTTCAAG (2) TTTGTAGTCA (2) TTTGTAGTCC (2) 13.1 0.0131 ONL GGTTTTCAAG (2) TCTGACCAGG (2) 3.8 0.0038