Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.259655
Cdc42bpa
Cdc42 binding protein kinase alpha
1
226751
Gene Ontology
kinase activity
Human Homolog
CDC42BPA[CDC42 binding protein kinase alpha (DMPK-like)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 36 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAAACTGTA
(
2
)
GATTCTTTTG
TTATAGTTTG
11.5
0.0115
Cb medulloblastoma
GATTCTTTTG
6.9
0.0069
P8 GC+1d culture
AGCGTCAGCC
CAAAACTGTA
(
2
)
4.6
0.0046
P8 GC+SHH+1d culture
CAAAACTGTA
(
2
)
GATTCTTTTG
TTATAGTTTG
7
0.007
3T3 fibroblasts
AGCGTCAGCC
TTATAGTTTG
10.5
0.0105
P1 cortex
CAAAACTGTA
(
2
)
GATTCTTTTG
9
0.009
E12.5 retina
CAAAACTGTA
(
2
)
16.9
0.0169
E14.5 retina
AGCGTCAGCC
CAAAACTGTA
(
2
)
20
0.02
E16.5 retina
CAAAACTGTA
(
2
)
GATTCTTTTG
21.7
0.0217
E18.5 retina
CAAAACTGTA
(
2
)
GATTCTTTTG
34.5
0.0345
P0.5 retina
CAAAACTGTA
(
2
)
GATTCTTTTG
25.6
0.0256
P2.5 retina
AGCGTCAGCC
CAAAACTGTA
(
2
)
GATTCTTTTG
49.4
0.0494
P4.5 retina
CAAAACTGTA
(
2
)
GATTCTTTTG
61.5
0.0615
P6.5 retina
AGCGTCAGCC
CAAAACTGTA
(
2
)
13.4
0.0134
P10.5 crx- retina
CAAAACTGTA
(
2
)
TTATAGTTTG
9.3
0.0093
P10.5 crx+ retina
CAAAACTGTA
(
2
)
GATTCTTTTG
5.7
0.0057
Adult retinal
AGCGTCAGCC
GATTCTTTTG
7.5
0.0075
ONL
CAAAACTGTA
(
2
)
3.8
0.0038
